| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0861 |
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| Symbol | |
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| ID | 4920743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 981749 |
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| End bp | 982756 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640162394 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001092992 |
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| Protein GI | 127511795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCA TGAAACGTTT GGCTGTTCTG GGTTTTGCTT GTGTCACTTC AATGGCCAAT
GCGGCCGACA GCATCACGGT TTATTCCTAC CGACAGGCTT TCCTTATTGA TCCCATTTTG
GCTGACTTTA CCAAGGAGAC AGGCATCAAG GTCAATCTGG TATTCACCAA ACAGGGCATT
GCCGAGCGAA TCGCCCGAGA GGGACGCCTG TCACCTGCGG ATCTCGTGCT TACCTCAGAT
TTCTCTCGTT TGATGGAGCT GGCGGATAAA GGGCTGGTGG CCTCGGTCGA CAGCCAGACC
TTAGCGCAGA ACATTCCAGC GAATCTTCGC TCGCCCAATG GCGATTGGTT TGCCCTGACG
AAACGCGTGA GAAATATCTA CTCTTCTAAG GAGCGCCTCG GCCCCTTGGA TATCGATTAT
GAAGATCTGG CGGATCCTAA ATTTAAGGGC AAGATCTGTA CCCGTAGCGG TAAGCACCCC
TACAACATCT CTCTGGTGGC GTCGATGATC GCCCATCATG GTGAGGCAGA CACTAAGACC
TGGCTAGAAG GCGTTAAGGC AAACTTGGCC CGCAAGCCAC AGGGTAACGA CAGGGCGCAG
GTGAAGGCGG TTAAAGAGGG GCTGTGTGAT ATCGCCATAG GTAACAGCTA CTACCTAGGT
AAGATGTTGC AAGATCCTAA GCAGGTGCCT TGGGCCGAGG CGGTCAACAT CAACTTCCCG
AATCAGAAAA ATCGCGGTGC TCACATCAAC GTCTCTGGCA TGGCACTGGC TAAGTATGCG
CCAGAGCGCG AGAACGCCAT CAAGTTGATG GAATACCTCT CGGGTCAACA GGCGCAGCAA
ACCTACGCCG AGCTCAACAT GGAATACCCG GTCAAGGCGG ATGTGAAGCC GTCTAAGCTG
GTCGCCTCCT GGGGTGACTA TAAGGCCGAT GAGCTGCCCA TCCACAAGCT GGCCGAGTAT
CACGGTGCGG CGGTGAAGTT GCTCGACCAA GTGAAGTTCG ATCTCTAG
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| Protein sequence | MRFMKRLAVL GFACVTSMAN AADSITVYSY RQAFLIDPIL ADFTKETGIK VNLVFTKQGI
AERIAREGRL SPADLVLTSD FSRLMELADK GLVASVDSQT LAQNIPANLR SPNGDWFALT
KRVRNIYSSK ERLGPLDIDY EDLADPKFKG KICTRSGKHP YNISLVASMI AHHGEADTKT
WLEGVKANLA RKPQGNDRAQ VKAVKEGLCD IAIGNSYYLG KMLQDPKQVP WAEAVNINFP
NQKNRGAHIN VSGMALAKYA PERENAIKLM EYLSGQQAQQ TYAELNMEYP VKADVKPSKL
VASWGDYKAD ELPIHKLAEY HGAAVKLLDQ VKFDL
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