| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0845 |
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| Symbol | |
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| ID | 4923687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 968589 |
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| End bp | 969131 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162378 |
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| Product | isochorismatase hydrolase |
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| Protein accession | YP_001092976 |
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| Protein GI | 127511779 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.052747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAAC CACAGGAATG TGTACTCGTC ATCGTCGATG TCCAGGGAAA GCTGGCCACC
CTGATGCACC AGGCAGAGGA ACTGGAAACC CGGCTCACCA CACTGGTAAA GGCGGCTGAG
CTGTTTGAGA TCCCTGTCGT CTGGCTTGAG CAGCTGCCCG AAAAGCTGGG GGCCACTAGC
CCGGCATTGG CCGAGCTGCT GACGCCTCAT TATCAGCCTA TCCCCAAGGC TCACTTTAGC
GGCTGGCACG CCGAGCCCTT CAGACAGGCA CTACAGCAGT ATGGCAGGCC CAAGGTGTTG
CTCGCCGGCA TAGAGACCCA CATCTGCGTC TATCAGACCT GCCGGGATCT GCTGGACAAC
GAATATGAGG TGCACTTGGT GACCGACGCC GTCTCCTCGC GAACCGAGGC CAATAAGCGG
TTAGGCTGTG AGATGATGAC CCAGCACGGC GCCCTGCTGA CCAACTGCGA GTCTTTGTTG
TTCGAGCTAC AGGCAGAGGC CAGTGGCGAC AGATTCAGGG CCCTGCTGAA ACTGATAAAG
TAG
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| Protein sequence | MLQPQECVLV IVDVQGKLAT LMHQAEELET RLTTLVKAAE LFEIPVVWLE QLPEKLGATS
PALAELLTPH YQPIPKAHFS GWHAEPFRQA LQQYGRPKVL LAGIETHICV YQTCRDLLDN
EYEVHLVTDA VSSRTEANKR LGCEMMTQHG ALLTNCESLL FELQAEASGD RFRALLKLIK
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