| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0843 |
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| Symbol | |
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| ID | 4923372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 965163 |
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| End bp | 966866 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162376 |
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| Product | nitrate/nitrite sensor protein NarQ |
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| Protein accession | YP_001092974 |
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| Protein GI | 127511777 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00390352 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG GCAGCCTCAC CTCCACCATA TTAAGGTTAA TGCTGGCCTT AATTTTACTT
TCCAGTGGAC TCGCCACCTT CGCCATAGCT AATTTGGCTT ATAGCCTGGG AGACGCCAGA
GCCATCAACG CCTCCGGCTC GCTGCGTATG CAGAGTTACC GTCTGATGTT CTACGCCAAC
TCTGGCAGCG AGGGAGCCGA CGACAAAATT AGAGAGTTTG AGGCCACCCT CCACTCGGAT
GCACTGAAAC GCTCACTCGA CTGGATGACC CCAGACGATC TCGCCTCCCA ATACCTGTTG
GTTATCCAGA AATGGCAGGT GATGAAGCAA TATATTGAAG AGGAGAACTC ACGCCTCTAT
GTCTCCGCCC TCAAAGATTT CGTCGACACC ATAGATCTCT TCGTGCTGGA AACCGAGGAG
TTCGCTGCCT TCAAGCTCAA GCTGCTGGCC GCCAGCCAGA TCACCGGCCT GGGGCTCATG
TTACTGATCG CCTTCTTCGC CGTACGCTTT ACCAAGCGTA AGGTGGTCAC CCCCCTCAAT
CAGTTGATGG AGTCGGCCAA CACCATCTCT AAGGGGGAGT TCGATGTCAC CATGCCAGAT
AGCGAATATA TTGAGCTCAG CTCGCTCAGC AACGCCCTGG CCACCAGTGC CAAAGAGCTG
TCGACCCTCT ATAACAACCT GGAAAATCAG GTCAAAGAGA AGACCTTCGC CCTCACCCGC
GCCAACAACG AGCTCAAGCT GCTCTACGAC AACCTGGTGA TGCTGCACTC GGGCAAGCTG
GAGATCAGTA CCCTGAAACA AGCGCTGAAT CAGCTCAGGG CCCACGAACC CAACAGTTTC
CTGCGCCTGG TGATCGCCCA AGATGATAAA GAGAAGCTCT ACATAGATGC CGACGGCGGC
TGGCCCATCG CCTCGCGCAG CCAGACCCGT TTCCCATTGA AATTTGCCGA CAACGAACTG
GGCTATCTTG AGGTCACTGC CCTGGGTGAA ATCAATCACC CCTTGTTCGA GAACTTCGCC
ATCATGCTGG CCCGCTCCAT CGTCATCTAT AACGCCGGCG AGCAGCGCCA GCAACTGGCA
CTGATGGAGG AGCGCGGCGT GATCGCCCGT GAGCTGCACG ACTCTCTGGG TCAGCTACTC
TCGTTTCTCA AGATCCAGGT CAACCTGCTC TCCAAGGGGC TGGACAGCCA GTGTCGCAGC
CCTCAGGTAG AGGAGCAGCT CAAGGAGATC AACGAAGGGG TCAACACCGC CTATGTGCAG
CTGCGTGAGC TGCTGTCTAC CTTCCGCCTG ACCATTAAAG ATCCCAACCT CAATCATGCG
ATCGAGATGA TGCTCGACCA GCTCAGGGGA CAAACTACGG CCAAGATCAC CCTGGAAGAT
AAGCTGCCTA TCCAGCTGCT CGGCGCTCAT CAACACATTC ATGTGCTGCA GCTCACCCGT
GAGGCGACCC TCAACGCCAT CAAGCATGCC CAGGCGGATC ATATTCATAT CTGTTGTACC
CGTAGCGGTA ACAACGTCAA GATCAGCATC AGCGACGACG GCGTTGGCCT TGAGAAGCTC
AAGGAGAGGG ATCAACATTT TGGCATAGGA ATCATGCATG AACGCGCAAG TCGCCTCTCG
GGTGTGGTAG ACTTCAGCAG CAATGAACAG GGCGGAACCA CAGTCACCTT GCTTTTCCCG
CCCGAACAAG AGCCGCGCCA GTAG
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| Protein sequence | MKKGSLTSTI LRLMLALILL SSGLATFAIA NLAYSLGDAR AINASGSLRM QSYRLMFYAN
SGSEGADDKI REFEATLHSD ALKRSLDWMT PDDLASQYLL VIQKWQVMKQ YIEEENSRLY
VSALKDFVDT IDLFVLETEE FAAFKLKLLA ASQITGLGLM LLIAFFAVRF TKRKVVTPLN
QLMESANTIS KGEFDVTMPD SEYIELSSLS NALATSAKEL STLYNNLENQ VKEKTFALTR
ANNELKLLYD NLVMLHSGKL EISTLKQALN QLRAHEPNSF LRLVIAQDDK EKLYIDADGG
WPIASRSQTR FPLKFADNEL GYLEVTALGE INHPLFENFA IMLARSIVIY NAGEQRQQLA
LMEERGVIAR ELHDSLGQLL SFLKIQVNLL SKGLDSQCRS PQVEEQLKEI NEGVNTAYVQ
LRELLSTFRL TIKDPNLNHA IEMMLDQLRG QTTAKITLED KLPIQLLGAH QHIHVLQLTR
EATLNAIKHA QADHIHICCT RSGNNVKISI SDDGVGLEKL KERDQHFGIG IMHERASRLS
GVVDFSSNEQ GGTTVTLLFP PEQEPRQ
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