| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0835 |
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| Symbol | |
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| ID | 4920851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 956689 |
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| End bp | 959337 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162368 |
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| Product | peptidase M1, membrane alanine aminopeptidase |
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| Protein accession | YP_001092966 |
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| Protein GI | 127511769 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0308] Aminopeptidase N |
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| TIGRFAM ID | [TIGR02412] aminopeptidase N, Streptomyces lividans type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGACTGT TTTCCCTGTG CGCTAGCCTC CTCCTCTGCC TCCTTATCGG CGCATGTCAA
AGCACCTCCC CCGGCAGCAA CCAGCGCAGC GAAAAGTCCC TCGGCATCAG CGCCAGTGTC
GCCAAGCAGC GTGCCAGCAG AGTTAGTCAG GTCAGCTACC AGCTGCACCT CGACCTTACC
CAGGCGAGAC GCTTCAAGGG CGAGGCGCAG ATCCAGTTTC AGTTAGCCGA TACCCAGCAG
GCCTTGAGCC TAGATCTGGA GCAGGCGCTC ATCAGTCAAC TTGTCATCAA CGGCCAGAAA
CTTTACCCCA ACTATGATGG CCACACTCTG GTGATCCCGG CCAGCCTGTT ACAGGGCGGC
GCCAACCTGA TAAAGGTGGA CTTTAGCAGT CCCTACAGCC ATGAAGACCA AGGGCTTATC
GAGTTTATCG ACCCCAAGGA TGGTCTTCGC TATCTCTACA GCCATTTCCT GCCCTCCAGC
GCCCAGACCC TGGCGCCGCA GTTTGATCAG CCAGATCTCA GGGCCAGCTA TCGGCTGAGC
GTGTTGGCAC CCAGCGACTG GCAAGTCGCC AGCGCGGCCA AGGTGCAGAG CCATCAGCCA
ATGGGCGAGA GCCATCAGGC ATTAGATGAG AGCCGTCAGA CTGTGGGCGA GAACCATCAG
CCAGCAGGCG AAAACAGTCT TTGGCAGTTT ATGCAGAGCG AGCCGGTCAG CCCCCATAAC
TTCTCCCTGC TCGCGGGGCC TTATCAAACC TGGCAGAGTG AGGCCGAGGG CATAGCGCTG
CTGCTGTTCG CCCGTCAGTC CCAGGCAGAA TCAATCGATG CCGAGACCTG GCTGTCACAA
ACCCAGCAGG CCCTTAGCCA TTATCAGCAG CGTCTTGGCA GCAAGTACCC CTTCGGTCAC
TACACCCAGG CAATCGTGCC TCACCTGCCG AGTGAGTTTC GCGCCAGTCA GGCTCAGACC
GCCTTCGATG AGCGAAACCT GCCCCAGGGC ACACCTCGCC GTGAGATCCT GCGGGCATTG
GCCGAGCAGT GGCTGGGCAA TCTGGTCACC CTCAAGTGGT GGGATCAGCT CTGGCTCAAT
CAGAGTCTGG CCTATCTGGT TGCCGACGAC GGCGAGGCCC AGCTGTTTGG CCAGACTCAG
GCCGATGAGC AACAGAGTTT TATCCGCAGC CCAGAGCAGG TGGAGCAGCA GATCGCCAAC
AGCCTGGAGC TGTTTTCGCA AGATCCCCTG CCGAGTCAAA ACAAGGCGAT CGCCCAACTT
AATCAGCTGA AATTTATGCT GGGCGATACC AACTTCTATC AGGGCATTGG CAATTATCTC
GAGCGCTTTG CCCTGCAAAA TGCCGACCTG AATGACTTTA TTTCGAGCCT AGAGCAGGTT
ACCAAACAGC CCCTGAGCCA ATGGAGCCAG GCGGCCTTTA AGCGCGCCGG CGTTACCCGC
CTTGAGGCAG AGTTCAGCTG CGCAGGCGAT CGCATATCGC GCTTTGACCT CAAACAACAT
AACGGCGATC TGGCTAGCAC ACAGAGGGTC AAGCTAGGTC TGTTTACCCT GGGGCGACAT
GGCCTGCACA AGAATCTGGT GAGCGAAGTC AATTACCAGG GCGCGAGCAC CGAGGTCAAG
CGCCTCAAAG GAGTGCGCTG TCCCGACTTG GTGTTTAGCA ACTATCAGAA CAAGGCCTAC
GTCAGGGTCA AGCTGGACAA GGCCTCTCTC GAGACGGCCC TCTTGCACCT TGGCAGCCTG
GAAGAATCCG ATCTCAGACG CATGCTGTGG CAATCCCTGT GGGAGTCTGT GCTGGCGGGC
GAACTGCCCC TGCCCCGCTT TATCGGCAGC ACCCTGGTGA ACCTGCCAGC TGAAACCGAT
CCCCAGGTGC TGGTCAGTGC TCAAGACCAG CTTAAACAGG CCAAGGCCCT GCTGGAGCAG
ATGAGTCCCA ATCAGCAGCG CTATAGCCGT CAGGCCCTCA ACGCCATCGC CCAGATGAGC
CTGCGCCTGA CCATCAGCAA CAAGGCTGAT CCCGCGCTGC AATCTCTGTG GTTCGACAAC
TACCTGCATT TTGCCGTCAG TCATCAAGCC AAGAGTCACC TTGCTGCGCT GCTCGATGAG
AGAGAGTCAC TGCCCGGCAT CACGCTCACG CCAGAGCGCC GCTGGCAGAT AATCACCCAC
CTTAATCGCT ATGACTATCC AGGCAGTGAA CGCCTGCTGC TCAAGGAGAA ACAGAAGGAT
ACTTCGCCCG AGGGGCAAGC GGCGGCGCTC GGCGCCCTGG TGGCCCGTCC CAGCGCCAAG
GAGAAACGCC AGTGGTTCGA GCGAATCCAG GCTCACAGCA AGGAGAGCGA TCCTCAGCTG
CTGGAGAAAT TAACTCAGGT GATGCGCCAC CTCTACCCCA GCGAGCAGAA GGCCCCGAGT
CAGGCCAGCG CCGAGCAGCG TCTGGCAGAA CTTGCCGAGG TGGACAAACG CAACAGCCAG
GCATTCATGC AGAGCTACAC GGCTAACCTG CTGCCCAGAA GCTGCAGTTA CGCCAGCCTG
CTCAGGCTGC AGGCACTGCT CGATAAACCA GAGGGCTATA GCCCAACGAC CCTGAGAGGC
ATCAATCGGA CCATAGCCGC CGAGCAAGAA TGTATCCGGG TGCAAGAGGC GATGCAGCCA
AATCCCTAA
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| Protein sequence | MRLFSLCASL LLCLLIGACQ STSPGSNQRS EKSLGISASV AKQRASRVSQ VSYQLHLDLT
QARRFKGEAQ IQFQLADTQQ ALSLDLEQAL ISQLVINGQK LYPNYDGHTL VIPASLLQGG
ANLIKVDFSS PYSHEDQGLI EFIDPKDGLR YLYSHFLPSS AQTLAPQFDQ PDLRASYRLS
VLAPSDWQVA SAAKVQSHQP MGESHQALDE SRQTVGENHQ PAGENSLWQF MQSEPVSPHN
FSLLAGPYQT WQSEAEGIAL LLFARQSQAE SIDAETWLSQ TQQALSHYQQ RLGSKYPFGH
YTQAIVPHLP SEFRASQAQT AFDERNLPQG TPRREILRAL AEQWLGNLVT LKWWDQLWLN
QSLAYLVADD GEAQLFGQTQ ADEQQSFIRS PEQVEQQIAN SLELFSQDPL PSQNKAIAQL
NQLKFMLGDT NFYQGIGNYL ERFALQNADL NDFISSLEQV TKQPLSQWSQ AAFKRAGVTR
LEAEFSCAGD RISRFDLKQH NGDLASTQRV KLGLFTLGRH GLHKNLVSEV NYQGASTEVK
RLKGVRCPDL VFSNYQNKAY VRVKLDKASL ETALLHLGSL EESDLRRMLW QSLWESVLAG
ELPLPRFIGS TLVNLPAETD PQVLVSAQDQ LKQAKALLEQ MSPNQQRYSR QALNAIAQMS
LRLTISNKAD PALQSLWFDN YLHFAVSHQA KSHLAALLDE RESLPGITLT PERRWQIITH
LNRYDYPGSE RLLLKEKQKD TSPEGQAAAL GALVARPSAK EKRQWFERIQ AHSKESDPQL
LEKLTQVMRH LYPSEQKAPS QASAEQRLAE LAEVDKRNSQ AFMQSYTANL LPRSCSYASL
LRLQALLDKP EGYSPTTLRG INRTIAAEQE CIRVQEAMQP NP
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