| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0832 |
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| Symbol | |
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| ID | 4920633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 953647 |
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| End bp | 955419 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162365 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001092963 |
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| Protein GI | 127511766 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA ATTATTCTCG CAGGGATTTT CTGGCCATGT CGGCCAAGGG TGTGGGTGCC
GCCGTTGTCT CCTATGGCCT GATGGGCTGT TCAAGCAGTG ACGACGATAA GCAAGAAACC
GCCCCTAAGG TTCAATTTCT ACACGGTATC GCCAGTGGTG ACCCTACCCC CAGCGCAGTG
ATCCTCTGGA CTCGAGTAAC CCCTGACACC GACGGTGATG TCAAGGTGGG TTGGGAGATA
GCTTCCGACG CCAATTTTAC CCAGATGATC TCAAACGGCG AGACCACCAC TAACGCCGAT
CGCGATTACA CAGTGAAGGT CGATGCCATC GGCCTGGATT CGGGTACCGC TTATTATTAT
CGCTTCATGT CGGGTGAGCA GGTCTCAAGT GTCGGCATGA CCAAGACGCT GCCAGAAGGT
GCCGTCGAGC AGGTCAAGCT GGCGGTGATG TCTTGCGCCA ACTTCCCAGC CGGTTACTTC
AACGTCTATG AGCTGGCGGG TCAGCAGGAA GGGCTGGACG CCGTGGTGCA CCTGGGTGAC
TACATCTATG AGTATGGCCG CGGCGGTTAT GCCAGCGAAC ATGCTGCCGA GCTTGGTCGT
GAAGTACTGC CTGCCGGTGA ACTCTTTACC CTGTCAGACT ATCGCACCCG TTACGGTCAA
TACCGCAGCG ACGAGTCTCT ACAGACCCTG CATGCCAAAG TGCCTTTCAT CACAGTTTGG
GATGACCATG AGGTGGCAAA CGACACCTGG TCTGGCGGCG CCGAAAACCA CAACGAGGGT
GAGGGCGACT TCGAGGCCCG TAAGATGGGC GCCCTGCAAG CCTATTTCGA ATGGCTGCCT
ATCCGTCCAT GGCGCGAGGG CAACCACGAG GAAATTTATC GCTCATTCAG CTTCGGCGAT
CTGGTCGACC TGCACATGCT AGACACTCGC GTACTGGCTC GTGACAAGCA GCTGGACTAC
GCCGACTATG TCGATGCCAC CACAGGTGCC ATGGACAGTG CCCGCTTCAT GGCGGATGTC
ACCAGCACAG AGCGGACTTT GCTGGGGGCC GAGCAGCTAC AGTGGTTGCA GGCCAGCCTG
CTGGGCGCCA CGGGTAAGTG GCAGGTGCTG GGACAACAGA TATTGATGGG CACCATGATG
CTGCCGGCCG CGATCGCCAT GCAGAAGCTC TCTGTCTATG AATATGCCGA GCTAGGCGCG
TTGGCGCAGC TGGCGGCCCG TGCGGCGGCC AATGATCCGA CCCTGACGCC ACAGGAATAC
AGCTTCCTCA TAGGTAACCA GTACAAGTTG ACGCCTGAGG TGATGGCGCT GCTGCAACTG
CCTTCTATCC CCTACAACCT GGATGCCTGG GATGGCTACG CCTATGAGCG TGAGGTGATC
CTGGCAACGG CCAAGCAGAA GGGCGCTAAC CTGGTGGTGA TCGCCGGTGA TACCCATAAC
GCCTGGGCCA ACGAGCTTAA GGACAGCCAT GGGGACCTGG TGGGCGTAGA GTATGCGACC
AGCTCGGTAT CCTCTCCTGG ACTCGAGTAT TACCTCGGCA TTCCCGCCGA CCAGCAGAGC
GTGACCGAGG CCGGCGTCGT CGACCTGGTC GATGGCCTCA AGTACACCAA CTTAAGGGAT
CGCGGTTTCA TGGTGCTGAC CTTCACCTCT GAGGCGGTGC GCAGCGACTG GCACTTTGTC
GATACCATTC TCGACAGCGA GTTCAGCGAG GCGACTGAGA AGCATTACGC GGCGATGACC
ATGGCGGGTG AGCCTAAGAT CACTGCGGCA TAA
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| Protein sequence | MKTNYSRRDF LAMSAKGVGA AVVSYGLMGC SSSDDDKQET APKVQFLHGI ASGDPTPSAV
ILWTRVTPDT DGDVKVGWEI ASDANFTQMI SNGETTTNAD RDYTVKVDAI GLDSGTAYYY
RFMSGEQVSS VGMTKTLPEG AVEQVKLAVM SCANFPAGYF NVYELAGQQE GLDAVVHLGD
YIYEYGRGGY ASEHAAELGR EVLPAGELFT LSDYRTRYGQ YRSDESLQTL HAKVPFITVW
DDHEVANDTW SGGAENHNEG EGDFEARKMG ALQAYFEWLP IRPWREGNHE EIYRSFSFGD
LVDLHMLDTR VLARDKQLDY ADYVDATTGA MDSARFMADV TSTERTLLGA EQLQWLQASL
LGATGKWQVL GQQILMGTMM LPAAIAMQKL SVYEYAELGA LAQLAARAAA NDPTLTPQEY
SFLIGNQYKL TPEVMALLQL PSIPYNLDAW DGYAYEREVI LATAKQKGAN LVVIAGDTHN
AWANELKDSH GDLVGVEYAT SSVSSPGLEY YLGIPADQQS VTEAGVVDLV DGLKYTNLRD
RGFMVLTFTS EAVRSDWHFV DTILDSEFSE ATEKHYAAMT MAGEPKITAA
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