| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0829 |
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| Symbol | |
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| ID | 4920595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 951706 |
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| End bp | 952125 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640162362 |
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| Product | LrgA family protein |
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| Protein accession | YP_001092960 |
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| Protein GI | 127511763 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTT ATCTCCCCCC ACTTAGAAAC TTGCTGCAGC TGTTGTTGCA GGTGGGGTTA
TTGTCTCTAC TGGCCCTGGC CGCCCAATGG TTGGTGACTC GCCTGGCACT GCCGCTACCC
AGCGGCGTGA TTGGCTTGGC GGCGCTTCTA GCCCTACTGG CGCTTAACTG GCTGCCGGAG
CGTTTCGTGG CCCGCGGCGC CGCCTGGCTG CTCGGTGAGC TGCTGCTCTT CTTCATTCCG
CCCGTGGTGG CCTCGATGCA TTATGCGCCG CTGCTGGAGC AGTATGGTGT CAGCCTGCTC
TGCACCTTAG TGCTGGGCAG TGTCAGTGTC TTGCTGATCA CCGGCTTCGT GATAGACAGG
GTCTTCAAGT ATGAGCGCCG CCTCAGACAG GCCGGCGCGG CCAAAGCGGT GGGCGTCTGA
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| Protein sequence | MATYLPPLRN LLQLLLQVGL LSLLALAAQW LVTRLALPLP SGVIGLAALL ALLALNWLPE
RFVARGAAWL LGELLLFFIP PVVASMHYAP LLEQYGVSLL CTLVLGSVSV LLITGFVIDR
VFKYERRLRQ AGAAKAVGV
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