| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0824 |
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| Symbol | |
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| ID | 4921436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 947238 |
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| End bp | 947879 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162357 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001092955 |
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| Protein GI | 127511758 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2910] Putative NADH-flavin reductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATAG CGATTATTGG CGCCACGGGT TGGATAGGCA GCACCTTGAT GCAGGAAGCC
TTAAGCCGCC AATTGCCGGT CACCGCCTTG GTGAGAGACT CGGCTAAATT AAGCGGTGAG
TTAGCCGGTC AGGTCACGGC GCGGGTCGTA GATCTCGAGC AGGGTATCGA CCCTCAGGTA
TTCGAGGGGA TCGATCTGGT GATCGCCTCC GTGGGTGGAC GAGCCTCTGG CCAGCATCAA
TTGGTGCCCC AGAGCGCCAA GGCGCTGCTG GAGCTGCTGC CCAAGACTCA GGTTAAGCGC
CTGCTGTGGG TCGGCGGCGC CGGCAGTCTC GAGTTGGCCC CGGGCCAGAC CCTGGTACAA
TCGCCAGGAT TCCCGCCTGA GTACAGGGAT GAGGCTTTAG CCCAGGGCGA AGCGCTCGAG
GTATTCAGGG CTAGTGACTC GCCGCTTAAC TGGACCTTTG TCAGCCCGGC GGCAGAGATC
TATCCCGGCG CCAGCGAAGG GCCCTATCGT ATCGGCGGCG ATAGGTTCTT TACCGATGAG
GAGGGACGCA GCCGCATCTC GGTCGCGGAC TACGCCAAGG CGATGCTAGA TCTAATTGAT
TCAGACAACT ATGCCCGCCA GCGGATCAGC GTGGCTTACT AG
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| Protein sequence | MNIAIIGATG WIGSTLMQEA LSRQLPVTAL VRDSAKLSGE LAGQVTARVV DLEQGIDPQV
FEGIDLVIAS VGGRASGQHQ LVPQSAKALL ELLPKTQVKR LLWVGGAGSL ELAPGQTLVQ
SPGFPPEYRD EALAQGEALE VFRASDSPLN WTFVSPAAEI YPGASEGPYR IGGDRFFTDE
EGRSRISVAD YAKAMLDLID SDNYARQRIS VAY
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