Gene Shew_0819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0819 
Symbol 
ID4921414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp943239 
End bp943613 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content53% 
IMG OID640162352 
Producthypothetical protein 
Protein accessionYP_001092950 
Protein GI127511753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTGT TAGATGCGCT GATGGGCAAT GCTGCCGAAG TGAACCTGGA TGAATTAGCC 
CAGGAGCTGG GGCCCATCAT GGGCGATAAC GAGCAGTTAG CGCTGGCTTA CCGTGTCATC
CGCGACATGT TTGTGTTTAC CAACAAGCGA CTCATCCTCA TCGACAAGCA GGGCGTTACC
GGCAAGAAGG TGAGTTATCA CTCTGTGCCC TATAAGGCGA TCACCCATTT TGAGGTGGAA
ACCGCCGGGA CCTTCGACAT GGACGCCGAG TTAAAGTTAT GGATCTCGGG GCAGAAAGAT
CCCCTGGTGA AGGAGCTGAA GAAAGGCACC GACGTCGTGG GCATTCAGAA GACGATTGCC
AACTTTTCTC TATAA
 
Protein sequence
MGLLDALMGN AAEVNLDELA QELGPIMGDN EQLALAYRVI RDMFVFTNKR LILIDKQGVT 
GKKVSYHSVP YKAITHFEVE TAGTFDMDAE LKLWISGQKD PLVKELKKGT DVVGIQKTIA
NFSL