Gene Shew_0817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0817 
Symbol 
ID4922778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp940800 
End bp941117 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content58% 
IMG OID640162350 
Productcupin 2 domain-containing protein 
Protein accessionYP_001092948 
Protein GI127511751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGT ACAACTTCTT TGCGTCTTTG CCGGATGACC TCACCCTGGA GGCGTTCGAG 
CCTCTGGTGG AAACCGGCGG CGTGTTGATC GAGCGTATTG TCTCTAAGGC CCACCGCACG
CCAGAGGGGC AATGGTACGA TCAGGACAGA AACGAGTGGG TCATGGTGCT TAAGGGGGAG
GCGAGCTTAG TGTTCGAGGG CGCCGAGGTG GTGCACCTTA AGATGGGCGA TCACCTGAAT
ATTCCTGCCC ACTGTCGCCA CAGGGTCAGC TGGACCAGCG AGCAGGAGGA GACCCTCTGG
CTGGCGGTGC ATTATTGA
 
Protein sequence
MEKYNFFASL PDDLTLEAFE PLVETGGVLI ERIVSKAHRT PEGQWYDQDR NEWVMVLKGE 
ASLVFEGAEV VHLKMGDHLN IPAHCRHRVS WTSEQEETLW LAVHY