Gene Shew_0815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0815 
Symbol 
ID4923653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp939182 
End bp939988 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content58% 
IMG OID640162348 
Productglucosamine-6-phosphate isomerase 
Protein accessionYP_001092946 
Protein GI127511749 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR00502] glucosamine-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.288891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG TTATTCTAAA AGATAGCGCC GAGGTGGCGG AATATGGTGC CAATCTCATC 
ATCAATCAGC TTAAGCGCAA GCCAGACTCT GTGCTGGGGC TGGCGACTGG CTCGACCCCT
GTGTCTCTCT ATCAGCGTCT GGTGGCGGCC AATCAGGCGG GCGCCGTCTC TTTCGAGGGG
GTGACCAGCT TTAACCTGGA CGAATATCTG GGGCTGGAGG GCAGTCATCC CCAGAGCTAT
CGCTATTTCA TGGACAGCCA ACTGTTCGAT GCTATCGACA TCAATAAGGC CAACACCCAT
GTGCCGCCGG GGGATGCCGA AGATCCCATC GCCGCCTGCG AGGCCTATGA GGCGCAGATC
CAGGCCGCCG GCGGCATAGA TATTCAGCTT CTCGGCATAG GCCGTAACGG TCATATCGGT
TTCAACGAGC CCTCATCTGG CCTGATGTCA CGTACCCGGG TCAAGACGTT GACCCAGGCG
ACTATTGAGG ACAATGCCCG TTTCTTCGCC GAGGGGGAAT ATCAGCCCCA TCTATCGATC
ACCATGGGGA TTGGCACCAT TTTAGATGCC AAGAAGGTGC TGCTGCTGGC CACAGGTGAG
AGTAAGGCCG ACGCCATTCG CGCCGCGGTT GAGGGCGCCC TGAGTGCAGC CTGTCCGGCA
TCGGCGTTGC AGCTGCATCG CGACGCAGTA TTGGTGATCG ATGAGGCGGC GGCATCTAAG
CTGGCCGACA AGGAGTTTTA TCGTCATATC GAGGCGGAGA ATCAGCTGCT GCAGGCCAGG
CTGGCGGCCC TCAAGGCCGG TGAGTAG
 
Protein sequence
MQIVILKDSA EVAEYGANLI INQLKRKPDS VLGLATGSTP VSLYQRLVAA NQAGAVSFEG 
VTSFNLDEYL GLEGSHPQSY RYFMDSQLFD AIDINKANTH VPPGDAEDPI AACEAYEAQI
QAAGGIDIQL LGIGRNGHIG FNEPSSGLMS RTRVKTLTQA TIEDNARFFA EGEYQPHLSI
TMGIGTILDA KKVLLLATGE SKADAIRAAV EGALSAACPA SALQLHRDAV LVIDEAAASK
LADKEFYRHI EAENQLLQAR LAALKAGE