| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0806 |
|---|
| Symbol | |
|---|
| ID | 4920670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 918384 |
|---|
| End bp | 919229 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640162339 |
|---|
| Product | MltA-interacting MipA family protein |
|---|
| Protein accession | YP_001092937 |
|---|
| Protein GI | 127511740 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.014478 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCCA TGAAGTACCT CTTGTCCGGT CTTATTTTCC TCACGGTTTT TTTCCTGTGC
GAGGCTAGGG CCGAAGAGCA GATAGATGAT ATTACCACGG GCGAATTTCA CTTCACCCTC
GCCCTAGGCT ATGGCGGAAT CGAGAACCCC AGGGCCAAGT CAGACGATAT CACCACCTAC
GCCCTGCCTA GCTGGTCCTA CTATGACGAC CGCTTCTATG TGGAAAACTT CACCCTGGGC
TACAGCCTGT ATGAGTCCGA TAGCCTGCTG GTCGACCTGC AGACCCGCCT CAACGAAGAT
GGCTTCTTCT TCGAACTCGA CGGCTGGAAC AAGGTCTTCC TGAGCGACAT CCTCGGCTTT
AAACCCAACA AGCAGCCGAT ATTCGGCCCG GCGATCCCCG AGGTGCCGAT CGAACGCAAC
ATCTCCTATC TCGGCGGACT CAGCACCACC TGGCTCACCC CCTACAGCGA TTTCACCCTG
GGCTATTTTC ACGACATCAG CGGCGTCCAC CAGGGCAACG AGATCCACCT TAAGGCCAAG
AAGAGCATGG CATTTTCCTG GGGCGCCCTG GGCTTCGAGG TGGGCGCGAT CCGCAAGAGC
AGCCAGCTGA TCAGCTACTA CTACCATTTC ACCGAGGAGG AGCTGGGCCG CAGCCGGGTG
CAGCAACCTC AGTCGGCGGC AATCAACTAT CACACCAGCG GCGTCGTCAA TGTGCCCCTG
TGGCAAGACA TTAATTTTAT AGCCATTATC ACCTACACTT GGTTAGGAGA CGAGATCACT
AAGAACCGCA TGATAGAGAA GGATGGATAC CTGTCAGGGT TCATCGGAGT CAGCTATGCC
TTCTAA
|
|---|
| Protein sequence | MKAMKYLLSG LIFLTVFFLC EARAEEQIDD ITTGEFHFTL ALGYGGIENP RAKSDDITTY
ALPSWSYYDD RFYVENFTLG YSLYESDSLL VDLQTRLNED GFFFELDGWN KVFLSDILGF
KPNKQPIFGP AIPEVPIERN ISYLGGLSTT WLTPYSDFTL GYFHDISGVH QGNEIHLKAK
KSMAFSWGAL GFEVGAIRKS SQLISYYYHF TEEELGRSRV QQPQSAAINY HTSGVVNVPL
WQDINFIAII TYTWLGDEIT KNRMIEKDGY LSGFIGVSYA F
|
|---|
| |