Gene Shew_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0799 
Symbol 
ID4921001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp911729 
End bp912214 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content59% 
IMG OID640162332 
ProductMarR family transcriptional regulator 
Protein accessionYP_001092930 
Protein GI127511733 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGA TCCAATTCAT GAGTCAATCC ACGAGCCAAG ATATTCAGCC TAATCCCCTA 
GCCCTCGAAA ACCAGGTCTG CTTCTCGCTT TATAGCGCCG CCAATGCCAT GGTGCGTGCC
TACCGCCCTC TGCTGGAGGC GTTGGACTTG ACCTATTCCC AATATCTGGC GATGTTGGTG
TTGTGGCAGG AGCCGGGGAT CAGCGTCAAG ACCCTGGGTG AGCAGCTACA CCTGGACTCG
GGCACCCTGA CACCTCTGCT AAAACGATTG GAAAGCAAAG GCTTGGTGAC CCGTGGGCGC
AGCGAAGCCG ACGAGCGGGT GCGGGTGTTG CAGCTGACCG ACGCAGGCCG TGAGCTGCAG
CAGCAGGCCC GGTCGATCCC TATGCAGATG CGCTGCAAAC TTGGGGGCGA GCCCGAAGAG
TTTGCCGAAC TCAAGCGCCT GTGTGACAAG GCCTACCGCT ACCTAGACGC GGCGAGTCAG
GGTTAA
 
Protein sequence
MMAIQFMSQS TSQDIQPNPL ALENQVCFSL YSAANAMVRA YRPLLEALDL TYSQYLAMLV 
LWQEPGISVK TLGEQLHLDS GTLTPLLKRL ESKGLVTRGR SEADERVRVL QLTDAGRELQ
QQARSIPMQM RCKLGGEPEE FAELKRLCDK AYRYLDAASQ G