Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0799 |
Symbol | |
ID | 4921001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 911729 |
End bp | 912214 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640162332 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001092930 |
Protein GI | 127511733 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCGA TCCAATTCAT GAGTCAATCC ACGAGCCAAG ATATTCAGCC TAATCCCCTA GCCCTCGAAA ACCAGGTCTG CTTCTCGCTT TATAGCGCCG CCAATGCCAT GGTGCGTGCC TACCGCCCTC TGCTGGAGGC GTTGGACTTG ACCTATTCCC AATATCTGGC GATGTTGGTG TTGTGGCAGG AGCCGGGGAT CAGCGTCAAG ACCCTGGGTG AGCAGCTACA CCTGGACTCG GGCACCCTGA CACCTCTGCT AAAACGATTG GAAAGCAAAG GCTTGGTGAC CCGTGGGCGC AGCGAAGCCG ACGAGCGGGT GCGGGTGTTG CAGCTGACCG ACGCAGGCCG TGAGCTGCAG CAGCAGGCCC GGTCGATCCC TATGCAGATG CGCTGCAAAC TTGGGGGCGA GCCCGAAGAG TTTGCCGAAC TCAAGCGCCT GTGTGACAAG GCCTACCGCT ACCTAGACGC GGCGAGTCAG GGTTAA
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Protein sequence | MMAIQFMSQS TSQDIQPNPL ALENQVCFSL YSAANAMVRA YRPLLEALDL TYSQYLAMLV LWQEPGISVK TLGEQLHLDS GTLTPLLKRL ESKGLVTRGR SEADERVRVL QLTDAGRELQ QQARSIPMQM RCKLGGEPEE FAELKRLCDK AYRYLDAASQ G
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