| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0792 |
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| Symbol | |
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| ID | 4923959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 904370 |
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| End bp | 904939 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162325 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001092923 |
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| Protein GI | 127511726 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.124423 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAT CTATCATCAA CACCGAAATC AAGCCTTTCT CAGCCACCGC ATACCACAAG
GGCGATTTCG TCTCTGTGAC TGAGCAAGAC CTACTGGGTA AGTGGTCTGT GGTTTTCTTC
TACCCTGCCG ACTTCACCTT CGTCTGCCCA ACAGAGCTGG GTGACATGGC TGACCATTAC
GAGAAGCTAC AGTCTATGGG TGTTGAAGTT TACTCTGTGT CTACCGACAC TCACTTCACT
CACAAGGCAT GGCACGATAG CTCAGACACT ATCGGCAAGA TCAACTACCC AATGATCGGC
GACCCAACGG GTGTTATCTC ACGCAACTTC GGCGTGATGA TCGAAGAGGA AGGTCTGGCA
CTGCGCGGTA CCTTCGTGAT CAACCCAGAG GGTCAGATCA AGGTTGCCGA GATTCACGAC
CTGGGTATTG GTCGTAGCGC TTCTGAGCTG GTTCGTAAGA TCCAAGCAGC TCAGTATGTT
GCGACTCACG ACGGTGAAGT TTGCCCAGCT GCATGGCAGC CAGGTGAAGA GACCCTAGCG
CCTTCACTGG ACCTGGTTGG TAAGATCTAA
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| Protein sequence | MTQSIINTEI KPFSATAYHK GDFVSVTEQD LLGKWSVVFF YPADFTFVCP TELGDMADHY
EKLQSMGVEV YSVSTDTHFT HKAWHDSSDT IGKINYPMIG DPTGVISRNF GVMIEEEGLA
LRGTFVINPE GQIKVAEIHD LGIGRSASEL VRKIQAAQYV ATHDGEVCPA AWQPGEETLA
PSLDLVGKI
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