| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0791 |
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| Symbol | |
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| ID | 4923958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 903429 |
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| End bp | 904172 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162324 |
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| Product | spermine synthase |
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| Protein accession | YP_001092922 |
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| Protein GI | 127511725 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0618517 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGACT ATACCACCCT ACATACCGGC GAAGATGATC ACGGCCCACT CCTGGTCATG
GAAGATAAGG AGGTTCGCCT GCTCTCCTTT GGGGATAACG ATGAGCAGAG CAAGCTGCTC
AAGTCGGCGC TGCATGTGCC CATGCATACC TATCTGCAGG CCATGTTGCT GGTGCTGCTG
TTTATCAAGC CAAAACGCGT CATCGTACTC GGCCTGGGTG GCGGCGGCCT CATTCATGCA
CTGCGTAATT TCGACCGCGG GATCAATATT ACCGCGGTCG AGCTGAGGGA GGCGGTGATC
GAGGTGGCCA AGCGTTATTT CTGGTTGCCG CTGGGTAAGA AGCTCAACCT GATCCATCAG
GATGCCAATG CGTTTCTGGC AGATGCTGAT CATAAGAAGG CTGACGTGAT CTTCGCTGAC
ATTTACCATG GCGACGGCGT GGACGAGCAG CAGCTCAGCG AGACCTTTAT CGCCAACGCC
GCCGCGCTGC TCAAGAGTGA AGGTTATTTG GTGCTTAACT GCTGGAAGGA GCATAGCCGT
AACGCCACCC TACTGGCCCT GTTACAGAAA CACTTTAGCG ACGTGCGCGC CTGCCTGACG
GGTGGTGGTA ACTGGGTGGT GCTCGCCGGT AAACAGGCGC GGCAGATAAG CGCCAGCGGC
CTCAAGGCGG AGGCGCAGCA GTTGTCGCTG CTGCTAGACT TTCAGTTAGG CCGCAGCCTG
ACCCGCTTCG AAACCTGGGA GTGA
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| Protein sequence | MSDYTTLHTG EDDHGPLLVM EDKEVRLLSF GDNDEQSKLL KSALHVPMHT YLQAMLLVLL
FIKPKRVIVL GLGGGGLIHA LRNFDRGINI TAVELREAVI EVAKRYFWLP LGKKLNLIHQ
DANAFLADAD HKKADVIFAD IYHGDGVDEQ QLSETFIANA AALLKSEGYL VLNCWKEHSR
NATLLALLQK HFSDVRACLT GGGNWVVLAG KQARQISASG LKAEAQQLSL LLDFQLGRSL
TRFETWE
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