| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0789 |
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| Symbol | |
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| ID | 4922377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 901545 |
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| End bp | 902513 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162322 |
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| Product | Mg2+ transporter protein, CorA family protein |
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| Protein accession | YP_001092920 |
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| Protein GI | 127511723 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0598] Mg2+ and Co2+ transporters |
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| TIGRFAM ID | [TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.957399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0628578 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCACGA CATTACTCTA TGATCCGCAA AATAATTCGC TCACCCGGGG CGACGCGTCT
CAGGTCGCCT GCTGGCAGCA GAGGGACGAC ACCATACTCT GGCTCAATAT CGACGGCGAG
ATAGACAGCG AGCTGAGCGA GTCGTTGCAG CGGGATTTCG GCCTGCACCC ATTGGCGCTG
CAGGACGCCT CGCGGGATCG CCATCCTCCT AAGATAGAGG ACTTCGACGA CCATACCTTT
ATTCTGCTTA GGGGCTTGTC GGCCGACTCT GACTCCATCA ACTGCGACAA CATAGTGCTG
GCGCTGTTTG TGGGGCCGCG TTTCATCGTG ACCCGCCACA GCAAACGTTC CCTCTCCATC
GAGCGCACCA TGACCTCGCT GGAGGCGGAC GAGCTGTCGC TGCAAAACAC AGGCGCCGTA
GCGCTGAAAC TCAGCCGCTA CGTGATCAAG CGTTATCATA AGATCCTGTT TGATCTCGAG
AGCCGGTTAG AGGAGCTGGA AACCGTGATG CTCACCACGG CGGACGATAA GATCTTGGCC
GAGGTAGTAC TCTACAAGAC AGATCTCACC CGGCTGAGAC GCAACTTTCA CTACCATGTG
GAGCTGTTCG ACAGCCTGCG CAGCGAGCCC TCTATCCCCT TCGACGACAG CCTCTACCAT
GAGATCAACG ACGTGTGCGA GCATCAACAC AGGGCGGCCA GCCTGGCAGA CCTCTTCTAT
CAGGTCTCAA GTGATCTGAT CGACGGTTAC ATCTCCATCA GCGCCCACAG GCTCAACAAC
ATCATGAAAG TGCTGACCAT CATCACCGCC ATCTTCGTAC CGCTGACCTT TATCGCCGGT
ATCTATGGCA TGAACTTCGA GTATATTCCC GAGCTGAAAC ATAAAGATGG CTACTTCATC
GTCTGGGGGG TGATGCTCAG CATCACGGCA GTACTGATCT GGCTATTCAG GCGCCGCAAA
TGGCTCTAG
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| Protein sequence | MLTTLLYDPQ NNSLTRGDAS QVACWQQRDD TILWLNIDGE IDSELSESLQ RDFGLHPLAL
QDASRDRHPP KIEDFDDHTF ILLRGLSADS DSINCDNIVL ALFVGPRFIV TRHSKRSLSI
ERTMTSLEAD ELSLQNTGAV ALKLSRYVIK RYHKILFDLE SRLEELETVM LTTADDKILA
EVVLYKTDLT RLRRNFHYHV ELFDSLRSEP SIPFDDSLYH EINDVCEHQH RAASLADLFY
QVSSDLIDGY ISISAHRLNN IMKVLTIITA IFVPLTFIAG IYGMNFEYIP ELKHKDGYFI
VWGVMLSITA VLIWLFRRRK WL
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