| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0781 |
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| Symbol | |
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| ID | 4922353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 892722 |
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| End bp | 896573 |
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| Gene Length | 3852 bp |
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| Protein Length | 1283 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162314 |
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| Product | peptidase S8/S53 subtilisin kexin sedolisin |
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| Protein accession | YP_001092912 |
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| Protein GI | 127511715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1404] Subtilisin-like serine proteases |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.223596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00753256 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAACTA AATTATCTCT AGCCATTTCA GCGGCGCTGA TCTCGAGTGC GGCTGTAGCC
AGCAACCAGT ACACCGCAAA TCCCTATGCT CCGGAAATCA CTTCTGCTGA TAGCTACAAG
AAGCCAGCAG CTTCTCAGCC TTCACAAGTG GCTCCGCAGC GCTTCATCAT CGAACTGAAC
TCTCCTGCCG TTGCTAAATA CCAAGGCGGC ATCGAGTCAA TGGCGGCCAC AGCCCCTAAG
AAAGGCCAAA AAGTTAACGT ACAGTCTGCG CCAGCTCAAA GCTACGCCAG TTTCCTAGCC
AAAGAGCAGT CACAATTTGT GAGTGAACTG GCGAAGAAAG TACCTAACGC CAAAGTTGAG
CAAAGCTTCA AGACCCTATT CAATGGTGTG ACTATTGTTG GTCAAGGTCT GAGCATCGAG
CAGCTAGCGG CCATGCCAAA CGTTAAGTCT GTCTACCCTG AGACTATGTA CGAAGCTAAC
ATGGACTCAT CTCACGACGT CATTAACACT GAAGCGATGT GGGAAGCGGT TTCTGGCATG
GAAAACGCCG GTAAAGACAT TCGTGTAGCG GTAATTGATA CAGGTATTCG CCCAGAAAAC
CCAATGTTTG CTGGCGAAGG TTTCACAAAA CCAGCCGAAG GAATGCCAAG CGACGACTAC
TGTTCGACAG TAGATGCAAG CTTCTGTAAC GACAAACTAA TCGTTGCCCG TTGGTCACAA
CCTACTTTTG AAGTGTGTGC CGACGAGCAT ATGAGCCCAC TGGGTTACGG TGGTCACGGC
TCTCACGTTG CCGGTACCTC TGTAGGTAAC AAAGTCACCA CTACCTACGA AGGTGTTGAA
GTTGAACTAT CTGGTGTTGC ACCTGCAGCC TACCTGATGG TTTATAAGGC ACTATTTACT
AAGACTGACT GTGCACGCGG CAGCGGCTCT AACATCATGC TGATGGAAGC AATGGAGCAC
GCCGTAAACG ATGGTGCAGA TGTTATCAAC AACTCTTGGG GTGGCGGCGC TGGTGGCGAC
CCAGCCAACA GCCCATACAA GGCTATGTAT GAAGCTGCTG AAGCGGCTGG CGTAGTCGTT
GTTACCGCTG CAGGTAACGA TGGTAACGGC CCACAAACTA TCGGTTGTCC AGCCTGTATC
GAATCAGGTA TTACCGTTGC TAACACTACT ACTGGTCGTT TCTTTGCTAA CACCCTAACC
GTTGATGGTG AAGAGATTCT TGCACTGCAG GGCAACAATG GCCTGCTAGA GGCAGATATC
ACTGCACCTA TCATCGCTGC AGCTAACATT GACGCAGAGA ACACCCTTGG CTGTACGCCA
TTTGCTGCCG ACTCTTTCAA AGACGGTATC GCCCTGATCT CTCGCGGTTC ATGTTCATTC
GCAACCAAGG CTGAAAATGC CGAGGCTGCG GGCGCGAAAG CTATGGTCGT TTACAACAGC
GTACCAGGCG CTCCAATCTC TATGTTCATG CCAGATTCAA CACTGCCAGC AGTGATGGTT
TCTGACGCCG ACGGCGCAGC TATCCTTGAA GGTCTGGGTG ATGACACCAC AGGTACTATC
GCGGCTGAAG TGACTCGTAT CGTTAACAGC AAGTTTGCCG ATATCCTGAA CCAGTCTAGC
TCTCGTGGTC CTAACGGTAA CCAAAACATT CTGAAGCCAG ATCTTGCTGC GCCAGGTACC
TCTATCCTGT CGGCAACTTC TCCTGATGAA GATGGTACTG ACTTTACCAC TATGTCTGGT
ACCAGTATGG CGAGCCCACA CGTTGCAGGT GCTGCTGCAC TGATGAGCCA GCTACACCCT
GATTGGTCAG CAAATGACAT CAAGACAGCG CTAACTTCTA CTGCTCACAT GGCAGGCGTA
CTCGATGATG ATGCGGCGAC TCCTGCCGAT CCATTTGCAA TGGGCGCGGG TCGTATGGAT
CTAGATGCTG CGGCTAAAGC AGTACTGACC TTCGACAAGC CTTCAATTGC TTCTGACTCT
TGTGTCGGTC CTTGTACTTT CACTCGTACC GTATACAACA AGAGTGACGA GAAGACCTCT
TGGGAGCTTT CAGCTTCTTC TGACAGCGCA GGTATCAGCG TATCGCCTTC ATCACTGGAA
CTGGAAGCTG GCGAATCAGC AACCTTCACT GTGACTGTTG ATTCAACCTT CAGCGAATAC
GGTGCTTGGA TCTTCGGTAA CGTCATGATC AAGAGCGCAT CTCACCAAGA CGCTCACCTA
CCAGTTGCTA TCCTGGCTAA AGAATCAAGT GATTCTTCAC TGATCTCTAC CATGGCAACC
AAGGCTGATC TGACAGCTGC TGAAGATATG CCAATCAAAG CCGTTGTAAA CAACACAGTA
TTTGAAAACA CTGTAACTGT TACCGCTATG GCACCAGAAG GCACTAAACT TACTTCTGCC
GATGACGTTG AAGTTACGCT AAACGGCGCA ACGCAAAACG GTTTCGAAGT TGATGAAGCG
CTTGGTCGCA TCACCTGGGT AGGTCAACTG GATCTGCCAC AGATTAAGTC TGCCAAAGGT
ACTGGCGCTA GCCCAAGTAT CTTCGACCTA GACCTGGCCT ATGTACCAGC TTGTGCTGAT
GGTTGTGATG AGAAATCATT CACCTTCAAC CTACCTGAGT TCAAGTACAA CGGTGCAACT
TACACCCAGC TAACCATCTC TGATAACGGT ATCGCAATCG TTGGTGGCGG TTCAGCATCT
GGTACTTGGA ACAACAAGGA ACTGCCAGAT AGCGCGAATC CAAACAACAT CCTGGCACCG
TTCTGGAGTG ACTACGACCT GAGCGACGGC ACTGTCGGCG ACACGGGTGG CGGACAGCTA
GGTATCCAGG TTGTTTCTGC TGGTGGTAAC GAGTGGATTG TTGTCGAGTG GAAAGATGCC
CAGCTATATG CTGACGCCTC TGGCAACAAG TACAGCTTCA GCCTTTGGAT CCAAACTGGT
GACGTAGAAG ATATTTGGTT CAACTACCTA GATATCCCTA ACATGCCAAG CAATGTCACT
ATCGGTGCAG AAAACATCAG CGGTAGCGTA GGTACAACCT TCCACTACAA CGGACAAGGT
GGCACTGTCA CTACTGACGA TTATGTTGCA CTGCAAGCGA CCTCTTCAGG CAGCGTAGAG
ATCGACTATC TGGCGACGCC AACTAGCTTC AACCCAGGTC AAACAGACAA CTTCTCTGTT
GACGAAGAAG CGACCTTGGA AGCAAACGTG TTAGAAAACG ACACTGTTAG CCAGAAAGTA
GCTCGCGTCT CTGTAACTGG TGACGGCATG ACAGCTAACG CACAACGCAT CATCGATGTT
GCGCCAGCTG GTGCACTAGG TGAAGCAACA CTGGTTGACG AGCCTGCACA CGGTGAAGTG
ACTCTAGAGA AAGATGGTTC TATTACCTAT ACACCAGAAG ATGATTTCTT CGGTAAAGAC
TCATTCACTT ACACCTCTAA GGATGCCGAA GGCAACCTGA ACGCAGCGAC CACTGTTAAT
GTTATGGTTA ACAACATCAA CGATGCACCT ACCGTGGCTC CTACAGGTAT GACAAGTACC
GAAGGCTTCG TGGTAACCGC TAAGGCCAAT GGCAAAGACG TTGATGGTGA CAGCCTGACC
TACACTTGGA CACAGACTGC AGGTACACCT GTTACCTTCA ACAACGGTGG CGCAGAAATT
AAGTTTACTG CTCCAGCAGG TAACAACACC CTGACCTTCT CTGTCGTTGC CAGCGATGGT
GAGCTAGAGA GTGAAGCGGG CACTGCGACT ATCACAGTTA ACGCCAAGGA AGAGAAATCT
TCAGGCGGTG GTTCACTGGG TTGGTTCGCT CTGCTGATGC TACCATTTGC CGCGCTACGT
CGTCGCAAGT AA
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| Protein sequence | MKTKLSLAIS AALISSAAVA SNQYTANPYA PEITSADSYK KPAASQPSQV APQRFIIELN
SPAVAKYQGG IESMAATAPK KGQKVNVQSA PAQSYASFLA KEQSQFVSEL AKKVPNAKVE
QSFKTLFNGV TIVGQGLSIE QLAAMPNVKS VYPETMYEAN MDSSHDVINT EAMWEAVSGM
ENAGKDIRVA VIDTGIRPEN PMFAGEGFTK PAEGMPSDDY CSTVDASFCN DKLIVARWSQ
PTFEVCADEH MSPLGYGGHG SHVAGTSVGN KVTTTYEGVE VELSGVAPAA YLMVYKALFT
KTDCARGSGS NIMLMEAMEH AVNDGADVIN NSWGGGAGGD PANSPYKAMY EAAEAAGVVV
VTAAGNDGNG PQTIGCPACI ESGITVANTT TGRFFANTLT VDGEEILALQ GNNGLLEADI
TAPIIAAANI DAENTLGCTP FAADSFKDGI ALISRGSCSF ATKAENAEAA GAKAMVVYNS
VPGAPISMFM PDSTLPAVMV SDADGAAILE GLGDDTTGTI AAEVTRIVNS KFADILNQSS
SRGPNGNQNI LKPDLAAPGT SILSATSPDE DGTDFTTMSG TSMASPHVAG AAALMSQLHP
DWSANDIKTA LTSTAHMAGV LDDDAATPAD PFAMGAGRMD LDAAAKAVLT FDKPSIASDS
CVGPCTFTRT VYNKSDEKTS WELSASSDSA GISVSPSSLE LEAGESATFT VTVDSTFSEY
GAWIFGNVMI KSASHQDAHL PVAILAKESS DSSLISTMAT KADLTAAEDM PIKAVVNNTV
FENTVTVTAM APEGTKLTSA DDVEVTLNGA TQNGFEVDEA LGRITWVGQL DLPQIKSAKG
TGASPSIFDL DLAYVPACAD GCDEKSFTFN LPEFKYNGAT YTQLTISDNG IAIVGGGSAS
GTWNNKELPD SANPNNILAP FWSDYDLSDG TVGDTGGGQL GIQVVSAGGN EWIVVEWKDA
QLYADASGNK YSFSLWIQTG DVEDIWFNYL DIPNMPSNVT IGAENISGSV GTTFHYNGQG
GTVTTDDYVA LQATSSGSVE IDYLATPTSF NPGQTDNFSV DEEATLEANV LENDTVSQKV
ARVSVTGDGM TANAQRIIDV APAGALGEAT LVDEPAHGEV TLEKDGSITY TPEDDFFGKD
SFTYTSKDAE GNLNAATTVN VMVNNINDAP TVAPTGMTST EGFVVTAKAN GKDVDGDSLT
YTWTQTAGTP VTFNNGGAEI KFTAPAGNNT LTFSVVASDG ELESEAGTAT ITVNAKEEKS
SGGGSLGWFA LLMLPFAALR RRK
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