| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0779 |
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| Symbol | |
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| ID | 4922352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 890141 |
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| End bp | 891499 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162312 |
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| Product | aspartate kinase III |
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| Protein accession | YP_001092910 |
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| Protein GI | 127511713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0527] Aspartokinases |
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| TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.705118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0010565 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTATTG TTGTTGCTAA GTTTGGTGGT ACCTCGGTTG CCGATTATGA GGCGATGAAC
CGCTGCGCCG ATATCGTATT GGCCAATCCT GAAACCCGCG TGGTGGTCGT CAGCGCCTCG
AGCGGCGTGA CCAACCTGCT GGTGGAGCTA ACTCAGGAGC ATGTGGACTT TGAGCGTCGC
CAGCAGCTGC TCAAGGCGAT CGCCTCGATT CAATATAAGA TCCTCGACGA GTTGGGTCAG
CCCCATGATG TGGCCGCCCG CCTCGATGCT ATATTAAGTA AGATTGCCAG CCTGAGCGAG
TCGCTCTCCC AAAACCGCAA TAAGGCGACC ACAGACGAAC TGCTTGCCCA GGGTGAGCAG
TGTTCATCTG TCTTGTTTGC TGCCGTGCTG AGAGAGAAGG GCGAGCGGGC GAGTGCCTTC
GATGTGCGTC AGGTGATGCG CACCGACAGT CATTTCGGTC GCGCCGAGCC GCAGATAGAG
GCGGTGAAGC AGCTTTGCAC AGAGCATCTG TTGCCCCTGC TTAGTGAGCA ACGAATCGTG
ACCCAAGGTT TTATCGGCGC CGATGAACAG GGAGCCACCA CCACGTTAGG CCGTGGGGGC
AGCGACTACT CTGCGGCCCT ACTTGCCGAG GCGCTGGATG CGTCTGCGGT TGAGATCTGG
ACAGATGTGC CGGGGATCTT CACCACGGAC CCGCGCCTTG CACCGAATGC GCGTCCTATC
CCTGAGATCA GTTTCAACGA GGCGGCCGAG ATGGCTACCT TTGGGGCCAA GGTGCTGCAC
CCGGCAACCA TTTTGCCGGC GGTCAGACAC AAGATTCAGG TGTTTGTCGG TTCCAGCAAG
GCGCCTGAGC TCGGTGGCAC CTGGATACGT CATCAGGTGA ACGACGAGCC TATCTATCGC
GCCGTGGCGG TGCGACGCGA CCAGACCCTA CTTAATCTTC ATAGCCTACA GATGCTGCAC
GCCCAAGGCT TCCTGGCCGA GACCTTTGCC ACCCTGGCGC GCCACAAGAT CAGTGTGGAC
TTAATCACCA CCTCAGAGGT GAACGTCTCT CTGACGCTAG ATAAGACGGG CTCAGATTCG
GCCGGAAACA GCCTGCTGAG CGAGGCCTTG TTGCAGGAGC TGTCGCAGCA TTGCCGGGTG
CGGGTCGAAG ATGGTCTGGC GCTGGTGGCG ATAGTGGGCA ATAAGATTGC CACCACGTCG
GGTGTGTGTC GCCGCGTATT CGAGGTGTTA GAGCCCCACA ATGTACGTAT GATCTGTCAG
GGCGCCAGCC CACACAACTT GTGCGTCCTG GTGGCCGAGT CTGAGGCGGC TCAGGTCGTC
AGCGCCCTGC ATCAAAACTT GTTTGAAGGG TCACTATGA
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| Protein sequence | MSIVVAKFGG TSVADYEAMN RCADIVLANP ETRVVVVSAS SGVTNLLVEL TQEHVDFERR
QQLLKAIASI QYKILDELGQ PHDVAARLDA ILSKIASLSE SLSQNRNKAT TDELLAQGEQ
CSSVLFAAVL REKGERASAF DVRQVMRTDS HFGRAEPQIE AVKQLCTEHL LPLLSEQRIV
TQGFIGADEQ GATTTLGRGG SDYSAALLAE ALDASAVEIW TDVPGIFTTD PRLAPNARPI
PEISFNEAAE MATFGAKVLH PATILPAVRH KIQVFVGSSK APELGGTWIR HQVNDEPIYR
AVAVRRDQTL LNLHSLQMLH AQGFLAETFA TLARHKISVD LITTSEVNVS LTLDKTGSDS
AGNSLLSEAL LQELSQHCRV RVEDGLALVA IVGNKIATTS GVCRRVFEVL EPHNVRMICQ
GASPHNLCVL VAESEAAQVV SALHQNLFEG SL
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