Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0778 |
Symbol | |
ID | 4920863 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 889300 |
End bp | 889731 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640162311 |
Product | hypothetical protein |
Protein accession | YP_001092909 |
Protein GI | 127511712 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00149988 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00290825 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACAG CAAGCGAACA TCTTTGGCAA TGCTATCAGC AAACGCAGTT CTTACTTACA CAACCTTTCT CCCCTTCGTT ATCATTTGCA ATCATTACCG CTCATAATCC TAAAGGCCAA CACCTTTCTC CCTCGCAAAA CCGTCTCCTC GACAAACAGC TTCAACGTCA TATTCAACGT CTTCAATATC CTTATCGTGC CCTAATCGGT GCCTCCAGTG ACAGAGGCCA TATGGAGAAG AGCTGGGCGG TGTCTATCGA TAAGGCCGCA GCAGTGGATC TTGGCAAGGT GTTTAATCAA AACGCCATCT ATTTTGTCGA TGAGGACGAG CTGCAACTGG TGCCTTGTCT GGTGGAGTAT GACGAGCTCA CCCTGGGCAA GTTTTCTGCC CGGGTCTGTC TGGTCAGCGA GCTGCCCGAC ATCAGCCGCT AG
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Protein sequence | MSTASEHLWQ CYQQTQFLLT QPFSPSLSFA IITAHNPKGQ HLSPSQNRLL DKQLQRHIQR LQYPYRALIG ASSDRGHMEK SWAVSIDKAA AVDLGKVFNQ NAIYFVDEDE LQLVPCLVEY DELTLGKFSA RVCLVSELPD ISR
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