Gene Shew_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0778 
Symbol 
ID4920863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp889300 
End bp889731 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content50% 
IMG OID640162311 
Producthypothetical protein 
Protein accessionYP_001092909 
Protein GI127511712 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00149988 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00290825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTACAG CAAGCGAACA TCTTTGGCAA TGCTATCAGC AAACGCAGTT CTTACTTACA 
CAACCTTTCT CCCCTTCGTT ATCATTTGCA ATCATTACCG CTCATAATCC TAAAGGCCAA
CACCTTTCTC CCTCGCAAAA CCGTCTCCTC GACAAACAGC TTCAACGTCA TATTCAACGT
CTTCAATATC CTTATCGTGC CCTAATCGGT GCCTCCAGTG ACAGAGGCCA TATGGAGAAG
AGCTGGGCGG TGTCTATCGA TAAGGCCGCA GCAGTGGATC TTGGCAAGGT GTTTAATCAA
AACGCCATCT ATTTTGTCGA TGAGGACGAG CTGCAACTGG TGCCTTGTCT GGTGGAGTAT
GACGAGCTCA CCCTGGGCAA GTTTTCTGCC CGGGTCTGTC TGGTCAGCGA GCTGCCCGAC
ATCAGCCGCT AG
 
Protein sequence
MSTASEHLWQ CYQQTQFLLT QPFSPSLSFA IITAHNPKGQ HLSPSQNRLL DKQLQRHIQR 
LQYPYRALIG ASSDRGHMEK SWAVSIDKAA AVDLGKVFNQ NAIYFVDEDE LQLVPCLVEY
DELTLGKFSA RVCLVSELPD ISR