| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0770 |
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| Symbol | |
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| ID | 4920855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 879109 |
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| End bp | 880020 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162303 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_001092901 |
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| Protein GI | 127511704 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0646575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTAGCTG AGAGCAACGA ATATCAGACC GATCCCCTTA TCGAGCCGTT TCTCGATGAT
CTCTGGGCCG CTAAGGGACT GAGCGATCAC ACGCTGCAGG CTTATCGCAG CGATCTCAGC
CACTTCGATC GTTACCTAAA TAAACAGGGT TCCAGCCTGC TATCGACCAG TCAGGCTGAG
GTGCGTGACT ACTTGGCCCT TCGGGTCGAG CATGGCTTTG CCAAGACCAG CAGTGCCAGG
CTACTCAGTA GCCTGCGGCG CTTCTATAAA TACCTGCTGG CCAAGAAGCT GATAGAAGTT
GACCCTATGG CGATGATCAA GCCGCCCAAG CTGGCGAGAA AGTTACCCGA TGCCTTGAGC
GAGGCGGACG TGGATCGTCT GCTTAGCGAG CCCAACCGGG AAGATCCCGT CGAGGCCAGG
GATCGCGCCA TGCTGGAGCT GCTCTATGCC AGTGGACTGC GGGTGTCTGA GCTGGTGGGG
CTGACGCTGG ATCAGATGAG TCTGAGGCAA GGTGTGGTAC GCATAGTGGG TAAGGGCAGC
AAGGAGCGCC TGGTGCCCTT TGGCGAGCAG GCGGGCGCAG AAATTGAGGA CTACCTCAAG
GCGGCCAGGT TCGAGCTGTT AAAAGGCAAG GCCAGCGACG TGGTGTTTCC CTCCAAGCGC
GGCAATATGA TGACCCGCCA GACCTTCTGG CACAGGATCA AGCTCTACGC CCAGCGTGCC
GGGATTGCGG TGCATCTGTC GCCTCACACC CTGAGACACG CCTTCGCCAC CCATCTGCTC
AATCATGGCG CGGATCTGCG GGTGGTGCAG CTACTGCTGG GCCACAGCGA TCTCTCCACG
ACCCAGATCT ACACCCATGT GGCCAAGGCC AGATTGGCCC AGCTGCATCA AGCCCATCAC
CCCAGAGGTT GA
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| Protein sequence | MLAESNEYQT DPLIEPFLDD LWAAKGLSDH TLQAYRSDLS HFDRYLNKQG SSLLSTSQAE
VRDYLALRVE HGFAKTSSAR LLSSLRRFYK YLLAKKLIEV DPMAMIKPPK LARKLPDALS
EADVDRLLSE PNREDPVEAR DRAMLELLYA SGLRVSELVG LTLDQMSLRQ GVVRIVGKGS
KERLVPFGEQ AGAEIEDYLK AARFELLKGK ASDVVFPSKR GNMMTRQTFW HRIKLYAQRA
GIAVHLSPHT LRHAFATHLL NHGADLRVVQ LLLGHSDLST TQIYTHVAKA RLAQLHQAHH
PRG
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