Gene Shew_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0768 
Symbol 
ID4921265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp876459 
End bp877190 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID640162301 
Productmethyltransferase small 
Protein accessionYP_001092899 
Protein GI127511702 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0650188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTA CCTTCAAGCA ATTTCACGTC GATGACAGCC ACTGCGGCAT GCCCGTCAGC 
ACAGATGGCG TCCTGCTGGG CGCCTGGGCA CCACTCACCC AGGCCAAAAC CATACTGGAT
ATCGGCGCCG GCAGTGGTCT GCTGAGCCTG ATGGCGGCCC AGCGCAGCGA GGCGGTGATA
CAGGCGTTAG AGATAGACCC CCTGGCGGCG CAGGACTGCC AGCACAACAT CGACCAGAGT
CCCTGGAGCG ATCGCATCAC ATTGATCCAG GCGGATCTGC TACAGTGGTA TCCCCTTGCT
CAGACTCAGG CTCAGACTCA GTTCGACCAT ATCCTCTGCA ACCCGCCCTA TTTCGACAAC
GGGCCTCAGT CTCAGTGCAG CAAACGCGCC CAGGCCAGAC ACACGGACAG CCTGGCATTT
GACCAGCTAT TGTCAGCCAT CAAGCAGCTA CTGGCACCCA CGGGCAAGGC GAGCCTGATC
TTGCCAAATG CCAGCCTGGG ACGATTTCTG CCCCTGCTGG CCGAATTTAA ACTCAAGCTA
AGTGCCAGGG TCGACATCAC CACAGCGCCC AACAAGGCGC CTCAGCGTCA TCTGCTCTGC
CTGAGCCACG CCGTCTCGAG CGCCGAGTCT AGCGAAGCGA TAGAGGCTGA GCACCTCAGC
ATTCGCGATG CCTCTGGGGC CTACAGCCAG GCTATGGTTG CCCTGACTCA GGCCTTCTAC
CTCAAGCTCT AA
 
Protein sequence
MPFTFKQFHV DDSHCGMPVS TDGVLLGAWA PLTQAKTILD IGAGSGLLSL MAAQRSEAVI 
QALEIDPLAA QDCQHNIDQS PWSDRITLIQ ADLLQWYPLA QTQAQTQFDH ILCNPPYFDN
GPQSQCSKRA QARHTDSLAF DQLLSAIKQL LAPTGKASLI LPNASLGRFL PLLAEFKLKL
SARVDITTAP NKAPQRHLLC LSHAVSSAES SEAIEAEHLS IRDASGAYSQ AMVALTQAFY
LKL