Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0768 |
Symbol | |
ID | 4921265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 876459 |
End bp | 877190 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640162301 |
Product | methyltransferase small |
Protein accession | YP_001092899 |
Protein GI | 127511702 |
COG category | [R] General function prediction only |
COG ID | [COG4123] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0650188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTTTA CCTTCAAGCA ATTTCACGTC GATGACAGCC ACTGCGGCAT GCCCGTCAGC ACAGATGGCG TCCTGCTGGG CGCCTGGGCA CCACTCACCC AGGCCAAAAC CATACTGGAT ATCGGCGCCG GCAGTGGTCT GCTGAGCCTG ATGGCGGCCC AGCGCAGCGA GGCGGTGATA CAGGCGTTAG AGATAGACCC CCTGGCGGCG CAGGACTGCC AGCACAACAT CGACCAGAGT CCCTGGAGCG ATCGCATCAC ATTGATCCAG GCGGATCTGC TACAGTGGTA TCCCCTTGCT CAGACTCAGG CTCAGACTCA GTTCGACCAT ATCCTCTGCA ACCCGCCCTA TTTCGACAAC GGGCCTCAGT CTCAGTGCAG CAAACGCGCC CAGGCCAGAC ACACGGACAG CCTGGCATTT GACCAGCTAT TGTCAGCCAT CAAGCAGCTA CTGGCACCCA CGGGCAAGGC GAGCCTGATC TTGCCAAATG CCAGCCTGGG ACGATTTCTG CCCCTGCTGG CCGAATTTAA ACTCAAGCTA AGTGCCAGGG TCGACATCAC CACAGCGCCC AACAAGGCGC CTCAGCGTCA TCTGCTCTGC CTGAGCCACG CCGTCTCGAG CGCCGAGTCT AGCGAAGCGA TAGAGGCTGA GCACCTCAGC ATTCGCGATG CCTCTGGGGC CTACAGCCAG GCTATGGTTG CCCTGACTCA GGCCTTCTAC CTCAAGCTCT AA
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Protein sequence | MPFTFKQFHV DDSHCGMPVS TDGVLLGAWA PLTQAKTILD IGAGSGLLSL MAAQRSEAVI QALEIDPLAA QDCQHNIDQS PWSDRITLIQ ADLLQWYPLA QTQAQTQFDH ILCNPPYFDN GPQSQCSKRA QARHTDSLAF DQLLSAIKQL LAPTGKASLI LPNASLGRFL PLLAEFKLKL SARVDITTAP NKAPQRHLLC LSHAVSSAES SEAIEAEHLS IRDASGAYSQ AMVALTQAFY LKL
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