| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0765 |
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| Symbol | |
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| ID | 4921801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 870547 |
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| End bp | 873696 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640162298 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001092896 |
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| Protein GI | 127511699 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.114262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCA ATACCAATAA GGGCATCATT GCCTGGTTCG CCCGCAACAG CGTGGCGGCC
AACCTCTTGA TGTTTGCGCT GCTGATCGGC GGCCTGTTCA GCACAGTGCT GATCAATAAG
GAGGTCTTCC CCTCCTTCGA GCTGAACTAT CTGCAGATCA CCGTCGCCTA TCCCGGCGCC
GCCCCTCAGG AGATCGAAGA GGGGATCAAC ATCAAGATCG AAGAGGCGAT CCAGGACATC
AGCGGCATCA AGAAGGTGAC TTCGGTCGCC AGCGAAGGCT CTGGCAGCGT CACCATAGAG
GTGGAGGATG GCTTCGATGC CCAGGATATC CTGGACGAGG CCAAGCTGCG CATCGACGCC
ATCGCCACCT TCCCCGACAA TATCGAGAAG CCCAACATCT TCCGCATCAA GCCGGAAAAC
AACGTCATCT GGGTCTCTGT GTATGGCGAC ATGAACCTGC ACGAGATGAA GGAGCTGGCC
AAGAGCATAC GTGAAGAGAT CACCGCCCTA CCCGCCGTCA CCCGCGCACA GGTTACCGGC
GTGCGTGACT ATGAGATAGG CATAGAGGTA TCCGAAGACA AGCTGCGTGA GTATGGCCTG
AGCTTCGCCG ACGTGGCGAT GGCGGTGCGT AACTCCTCTA TCGACCTGCC CGGCGGCTCA
ATTCGCGCCG AGGATGGCGA CATCCTACTG CGCACCAAGG GCCAGGCCTA CACGGGCGAT
GATTTTGCCA AGATAGTGGT CAAGACCCGC AAGGATGGCA GCCGCATCAT GCTGCCCGAG
GTGGCCAACA TTCGCGACGA TTTCGAGGAG CGTCTGGAAT ATACCCGCTT CAACGGTAAA
CCGGCGGCCA TTATCGAGGT GCTGAGCGTC GACGATCAGA ACGCGCTGGA TATCTCCTCT
CAGGTCAAAG CCTATGTAGA GGAGCGCCGC GCCACCCTGC CCGCCAGCGC CCAGCTAGAT
ACCTGGGGCG ACCTGACCCA CTACCTCAAG GGCCGTCTCA ACATGATGCT GTCGAACATG
TTCTATGGCG CCCTGCTGGT ATTTATCATT CTGGCGCTGT TCCTCGACTT GCGTCTGGCC
TTCTGGGTGA TGATGGGCCT GCCGGTCTGT TTCCTCGGCG CCATGCTGCT GATGCCGCTG
GAGCCCTTCT CGCTGTCGAT CAACATGCTG ACCCTGTTCG CCTTCATTCT GGTGCTGGGT
ATCGTCGTGG ATGACGCCAT CGTCATCGGC GAGAGTGCCT ATACGGAGAT CGAGCGCCAC
GGCCACTCGC TGGACAATGT GATCAAGGGG GCCCATAAGG TCGCCATGCC CGCCACCTTC
GGCGTGTTGA CCACCATTGC TGCCTTCATC CCCATGCTGA TGGTCTCCGG CCCCATGGCG
ATCATCTGGA AGTCCATCGG CCTGGTGGTG ATCCTCTGTC TCGCCTTCTC ACTGGTGGAG
TCTAAGCTTA TTCTGCCGGC GCACCTGGCT CACCTAAAAC CGCGTCGCCC GAGCCCTAAC
CCTAACCTGT TTGTGCGCTT CAAGACGGCG CTTAACAACA AGGTGCAACA CTTCATCCAC
CACAGCTACC GCAGCTTTAT CGGTCGCTGT ATCGAGCACA GATACAATGT GGTCGCCACC
TTCGTGGGCG TGCTTATCCT CTCGGTGGCA CTGGTTGCCA GCGGTAAGGT GCGCTGGGTC
TTCTTCCCCG ATATCCCGTC CGACTTCATT CAGGTGCGAC TGGAGATGGA TGTAGGCAGC
TCAGAGGCCA ACACCCTCAA GGTGGTCAAG GAGATAGAGA ACGCCCTCTA TGTGATGAAC
GATCAGATGG AAGACGAGTA CGGCTACCCT GTGGTGAAGC ACAGCTTCAT CAACATGGGC
TCGCGCACCT CCGCCTTCAT CTTCGCCGAG CTGACCAAGG GCGAAGACAG GGACGTAGAC
GGCGTCACCA TCGCCGATGC CTGGCGCAAG GCGCTGCCTG AGCTTATCTC TGTAAAGAAG
CTTAACATCA ATGCCAGCAC CAACGACGCC GGTGGCGATA TCTCCTTCAG GCTCACCTCG
AGCGATCTCG AGCAGCTCTC CCAGGCCGCC GACGAGCTGA AACAGAAGCT GCGCACTTAC
GAGGGGGTGT ATGACATCTC GGACAACTAC TCCTCCGGCA GCCACGAGAT CCGCCTGGCG
ATCAAGCCCG AGGCCGAGGC ATTGGGGCTG ACCCTGTCGG ATCTGGCCAG CCAGGTGCGT
TACGGCTTCT ACGGCTATGA GGCCCAGCGT ATTCTGCGCA ACAAAGAAGA AGTCAAGGTG
ATGGTGCGCT ATCCGCTTGA GCAGCGCCGC ACCCTGGGGC ATTTGGAAAA CATGATGATC
CGTACGCCCC AAGGCACCTC GGTGCCCTTC TCCAGCGTGG CCGACATAGA GCTGGGTGAT
TCCTACTCGT CGATCACCCG TGTCGATGGC CGCCGCGCCA TCACGGTTAT CGCCAACGCC
AACAAGAATG TGGTCGAGCC CTCCAAGGTG GTGGGTGAGA TCCAGAAGGA TTTCCTGCCT
TACCTTGAGA GCAAGTATCG CCACATCTCC ACCACACTCG ATGGTGGCAG CGCCGATGAG
CAGAGCGCCA TGATAGGCCT AATCCAGGGC TTTTTCTTCG CCATGTTCAC CATCTATGCG
CTTATGGCAA TTCCGCTCAA GTCCTACAGC CAGCCGCTGA TCATCATGTC GGTGATCCCC
TTCGGTATCA TAGGCGCTTT GTTCGGCCAC TTCATCCTGG GGCTCTCCAT GAGCGTGCTC
AGCCTGTGTG GTATCGTGGC GCTGGCCGGG GTGGTGGTAA ACGACTCGCT GATCCTGGTG
GATTTTGTCA ACCGCGCCCG CGCTCAGGGC CTGCCGCTTA AAGATGCCGC CATAGACGCG
GGCTGTTATC GTTTCCGGGC GATCATCCTT ACCTCTATGA CCACCTTCGT CGGTCTGGTG
CCCATCATCC TCGAGCGCAG TCTACAGGCG CAGATTGTGA TCCCTATGGC CACCTCGCTG
GCCTTCGGTA TCCTCTTCTC CACCGTGGTG ACCCTAGTAC TGGTGCCCGT GCTCTACATC
ATACTCAACG ATATCAGGCA GCTCACCGGC CGCGTGTTCC GTTGGTGGTG GCAGCCCCGT
AGCCATAGCG TCGAGGGCGA GCAGTCCTAA
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| Protein sequence | METNTNKGII AWFARNSVAA NLLMFALLIG GLFSTVLINK EVFPSFELNY LQITVAYPGA
APQEIEEGIN IKIEEAIQDI SGIKKVTSVA SEGSGSVTIE VEDGFDAQDI LDEAKLRIDA
IATFPDNIEK PNIFRIKPEN NVIWVSVYGD MNLHEMKELA KSIREEITAL PAVTRAQVTG
VRDYEIGIEV SEDKLREYGL SFADVAMAVR NSSIDLPGGS IRAEDGDILL RTKGQAYTGD
DFAKIVVKTR KDGSRIMLPE VANIRDDFEE RLEYTRFNGK PAAIIEVLSV DDQNALDISS
QVKAYVEERR ATLPASAQLD TWGDLTHYLK GRLNMMLSNM FYGALLVFII LALFLDLRLA
FWVMMGLPVC FLGAMLLMPL EPFSLSINML TLFAFILVLG IVVDDAIVIG ESAYTEIERH
GHSLDNVIKG AHKVAMPATF GVLTTIAAFI PMLMVSGPMA IIWKSIGLVV ILCLAFSLVE
SKLILPAHLA HLKPRRPSPN PNLFVRFKTA LNNKVQHFIH HSYRSFIGRC IEHRYNVVAT
FVGVLILSVA LVASGKVRWV FFPDIPSDFI QVRLEMDVGS SEANTLKVVK EIENALYVMN
DQMEDEYGYP VVKHSFINMG SRTSAFIFAE LTKGEDRDVD GVTIADAWRK ALPELISVKK
LNINASTNDA GGDISFRLTS SDLEQLSQAA DELKQKLRTY EGVYDISDNY SSGSHEIRLA
IKPEAEALGL TLSDLASQVR YGFYGYEAQR ILRNKEEVKV MVRYPLEQRR TLGHLENMMI
RTPQGTSVPF SSVADIELGD SYSSITRVDG RRAITVIANA NKNVVEPSKV VGEIQKDFLP
YLESKYRHIS TTLDGGSADE QSAMIGLIQG FFFAMFTIYA LMAIPLKSYS QPLIIMSVIP
FGIIGALFGH FILGLSMSVL SLCGIVALAG VVVNDSLILV DFVNRARAQG LPLKDAAIDA
GCYRFRAIIL TSMTTFVGLV PIILERSLQA QIVIPMATSL AFGILFSTVV TLVLVPVLYI
ILNDIRQLTG RVFRWWWQPR SHSVEGEQS
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