Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0755 |
Symbol | |
ID | 4922155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 856859 |
End bp | 857923 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640162288 |
Product | fructose-1,6-bisphosphate aldolase |
Protein accession | YP_001092886 |
Protein GI | 127511689 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases [TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.119495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAA TTTCCCTACG TCAACTGCTA GACCATGCCG CAGAGCACGG ATACGGCGTT CCCGCGTTCA ACGTTAACAA CCTGGAGCAG ATGCGCGCCA TTATGCAGGC GGCAGAAGCC ACAGACAGCC CGGTTATCGT TCAGGCGTCA GCCGGTGCGC GTAAGTATGC TCGTCCTCAG TTCCTTAAGT ATCTGATGGC GGCGGCGCTC GAGCAGTATC CAGATATCCC TGTGTGTATC CACCAGGATC ACGGTACTCA CCCTGACGTG TGTCAGCGTT CTATCCAGCT GGGTATGTCT TCAGTCATGA TGGACGGCTC ACTGATGTCA GACGGTAAGA CACCTGCTTC ATACGAGTAC AACGTCGACG TGACCCGCAA GACGGTTGCC TTCGCCCACG CCTGTGGTGT GTCGGTAGAG GGTGAAATAG GCTGTCTGGG TAGTCTGGAA ACTGGTCAAG CCGGTGAAGA AGATGGTGTT GGCGCCGAAG GTATCCTGAG CGAAGATCAG CTGCTGACCA CGCCGGAAGA GGCGGCGCGT TTCGTGGCCG ATACTCACGT GGATGCCCTG GCCATCGCTA TCGGTACCAG CCATGGTGCC TACAAGTTTA GCCGTAAGCC TACCGGCGAC GTGCTACGTA TCGACCGTAT CAAGGAGATC CACGCACGTA TTCCTAACAC CCACTTGGTC ATGCACGGTT CTTCTTCTGT GCCGCAAGAG TGGCTGGAAG TGATCAACCA GTATGGCGGC GCCATCCCTG AAACTTATGG TGTGCCACTG GAAGAGATCG TCGAAGGTAT CAAGCACGGC GTACGTAAGG TTAATATCGA CACCGACCTG CGTCTGGCCT CTACCGGCGC GGTACGTAAG TTCCTGGCGG AGAACCCAAG CGAGTTCGAC CCTCGTAAGT TCCTGAAAGC CTCTATGGAT GCGATGGCAG ACATCTGTAC CGTTCGCTAT GAAGCCTTCG GTGCGGCGGG CATGGGTTCT AAGATCAAGC CTAAGTCACT GCAGGCCATG TATAAGGCAT ACCAGTCTGG CGAGTTAGAT CCACAGGTGA ACTAA
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Protein sequence | MALISLRQLL DHAAEHGYGV PAFNVNNLEQ MRAIMQAAEA TDSPVIVQAS AGARKYARPQ FLKYLMAAAL EQYPDIPVCI HQDHGTHPDV CQRSIQLGMS SVMMDGSLMS DGKTPASYEY NVDVTRKTVA FAHACGVSVE GEIGCLGSLE TGQAGEEDGV GAEGILSEDQ LLTTPEEAAR FVADTHVDAL AIAIGTSHGA YKFSRKPTGD VLRIDRIKEI HARIPNTHLV MHGSSSVPQE WLEVINQYGG AIPETYGVPL EEIVEGIKHG VRKVNIDTDL RLASTGAVRK FLAENPSEFD PRKFLKASMD AMADICTVRY EAFGAAGMGS KIKPKSLQAM YKAYQSGELD PQVN
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