Gene Shew_0744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0744 
Symbol 
ID4920573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp845971 
End bp846384 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID640162277 
Productprotein of unknown function DUF306, Meta and HslJ 
Protein accessionYP_001092875 
Protein GI127511678 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAAGA AGTTAATGTT TATCGCCGGT ACCTTGCTCG GCTTATCTGC CTGTCAAAGC 
GCATCCCTCA CAGGCGGCGA GGATCTGGAT ATTTTAGGCA GCTGGCATAT CGAGGCCGCC
CAGGGTAAGG CCGTCATCGA CTACAGCCCG GCCCAGCTGG TGTTTGCCGA AGATGGCGCA
TTGAGCGGCA ACAACAGTTG TAACCAGTTC TTCGGCCAGT ATCAGTTAGA GGGTCAGGCC
CTGACCCTCT CCCCCGCCGG TAGCACGATG AAAGCCTGTG TCGACGCCTT GATGCAGCAG
GAGCGCAATG TCATGCAGGC CATGTCTCAG GTCACCCAGG TCAAGCTGGT CAAAGGCAAG
TTGCTGCTCA GCGACGCCGA TGGCGAAACC CAGCTGGTCC TCAGCAAGCA GTAA
 
Protein sequence
MFKKLMFIAG TLLGLSACQS ASLTGGEDLD ILGSWHIEAA QGKAVIDYSP AQLVFAEDGA 
LSGNNSCNQF FGQYQLEGQA LTLSPAGSTM KACVDALMQQ ERNVMQAMSQ VTQVKLVKGK
LLLSDADGET QLVLSKQ