Gene Shew_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0736 
Symbol 
ID4921531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp837432 
End bp838472 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content58% 
IMG OID640162269 
Productaldo/keto reductase 
Protein accessionYP_001092867 
Protein GI127511670 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATA CAAGACTCCC CCATTCCAGC TTAGACGTCA GTAAAATTTG CCTGGGCACC 
ATGACCTGGG GTGAACAGAA TACTCAGGCC CAGGCCTTCG AGCAGCTCGA CTACGCCATC
GGACAGGGCA TCAACTTTAT CGATACCGCC GAGATGTACC CTGTGCCGCC CAAGGCCGAG
ACTCAGGGCG AGACAGAACG TATCCTGGGT AACTACCTCA AGGCCAGGGG CAAGCGTGAC
GATCTCATTA TCGCTACCAA GGTCGCGGCC CCCGGCGGCA AGAGCGATTA TATCCGTCAG
AACATGGCGC TGGACTGGCG CAACATCCAC CAGGCGGTCA ACGACTCCTT GGAGCGCTTG
CAGATAGAGA CCATAGATCT CTATCAACTC CACTGGCCGG ATCGCAACAC CAACTTCTTC
GGCGAGCTCT TCTATGAACA GCAGGATGAT GAGAAGCTCA CCCCCATAAT CGATACCCTG
GAGGCCCTGG CCGATCTGAT CAAGGCCGGT AAGATCCGCT ACATAGGCGT TTCCAACGAG
ACCCCCTGGG GATTGATGAA GTATCTGCAG CTGGCGGAGA AGCACGGCCT GCCGCGCATC
ATCAGCGTAC AGAATCCCTA TAACCTGCTT AACCGCAGCT TCGAGGTGGG CATGGCCGAG
ATTGCCCACA GGGAAGAGCT GCCACTGCTG GCCTACTCGC CACTGGCATT TGGCGCCCTG
AGCGGCAAAT ACATAGGTGG CCAATGGCCA GAGGGGGCGA GACTCACACT GTTTAAGCGC
TTCGCCCGCT ACACAGGCTC GCAGATGGCC CTGGATGCCA CCCAAGCCTA TGTGGAGCTG
GCGCGGGAGT TCAACCTCAG CCCGGCGCAG ATGGCACTGG CCTTCGTCAA CGGCCGCCGC
TTCGTCGGCA GTAACATCAT AGGCGCGACC AACCTAGAGC AGCTGAAAGA GAATATCGAC
AGCACCTCGG TCAGCCTGAG CGCCGAGTTG ATGGGCCGAA TCGACGAGTT GGCGGCCATT
TACCGCATTC CCTGCCCCTA A
 
Protein sequence
MDYTRLPHSS LDVSKICLGT MTWGEQNTQA QAFEQLDYAI GQGINFIDTA EMYPVPPKAE 
TQGETERILG NYLKARGKRD DLIIATKVAA PGGKSDYIRQ NMALDWRNIH QAVNDSLERL
QIETIDLYQL HWPDRNTNFF GELFYEQQDD EKLTPIIDTL EALADLIKAG KIRYIGVSNE
TPWGLMKYLQ LAEKHGLPRI ISVQNPYNLL NRSFEVGMAE IAHREELPLL AYSPLAFGAL
SGKYIGGQWP EGARLTLFKR FARYTGSQMA LDATQAYVEL AREFNLSPAQ MALAFVNGRR
FVGSNIIGAT NLEQLKENID STSVSLSAEL MGRIDELAAI YRIPCP