| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0735 |
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| Symbol | |
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| ID | 4921530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 836116 |
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| End bp | 837327 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162268 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001092866 |
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| Protein GI | 127511669 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTAA GCCAGCTGCG CAGCCAGTTT CCCGCTCTCA CCCAGTCACT CGGCGACTAT
CCGCTGGTGT ACCTGGATAC GGCCGCGACC AGTCAGAAAC CCCAAGGGGT GATCGACGCC
ATGGGCCGCT ACTATCAGGC GGACAATGCC AACGTGCACC GCGCCGCCCA TCAGCTGTCT
GCCCGCGCCA CCAGCCAATA TGAGGCGGTG CGCGACAAGG TAAAGGCTTT CATTAAGGCA
GACCGCTGCG AAGAGATCAT CTTTACCCAT GGCACCACAG AGGGGATCAA CCTGGTGGCC
CTGGGGCTGG CCAGCCAGCT AAAGGCTGGG GATCTGATCC TGTTAGACAG CGCCGCCCAT
CACGCCAACA TAGTGCCCTG GCAGATGCTG GCCAAGCAAA CCGGCGCCGA GATACGGCCT
ATCCCGCTGA CCCCTGAGGC GCGCCTGGAT CAGGCGGCCT ATCAAGCGCT ACTGCAACGT
GGCCCACGTG TCGTCGCCCT CAGCCATGTC TCCAACGTGC TGGGCACGGT CAATCCCGTT
AGAGAGATGA TCGCACAGGC CAAGGCGGTA GGCGCACTGA CGCTTATCGA CGGCGCCCAG
GCGATCGCCC ATCTCGAGGT GGATATGCTG GCCCTGGATT GCGACTTCTA CCTCTTCTCC
GGCCACAAGA TGTATGGCCC GACGGGTATA GGCATCTTAT ATGGCCGCTA TGAAGCGCTC
GACAAGCTCG AGCCCCTGCT CACTGGCGGT GAGATGATCA AGCAGGTGAG CTTCGAGGGC
ACCACATTTA ATATCCTGCC CAACCGTCTG GAGGCGGGTA CGCCGCCCAT CGCCGAGGTG
ATAGGTCTGG GGGCCGCCAT CGACTTTATC CAGTCCCTGC CCCGCGCCGA ACTCAGGGCC
CATGAACAGG CCTTGCTCAA GCGTCTTCAG GATGAGCTCA GGGCATTGGG TGGCATCAGC
CTCTATGGCG CCCACGGCGA CAATGTCGGC GCCGTGGCCT TTAACCTCAC CGGCGAGCAT
CACCAAGACG TAGGGATCTT GCTGGATCAG CAGGGGATCG CCGTGCGCTG CGGTCATCAC
TGCGCCATGC CTCTGATGCA GACCCTGGGG CTGTCAGGCT GCTGCCGCGC CTCCCTCGGC
GTCTATAGCA ATGATGAAGA TGTCGATCGC TTCATCCAGG CGCTAAAATC GGTAAAAGAG
CTGCTGCTTT AA
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| Protein sequence | MELSQLRSQF PALTQSLGDY PLVYLDTAAT SQKPQGVIDA MGRYYQADNA NVHRAAHQLS
ARATSQYEAV RDKVKAFIKA DRCEEIIFTH GTTEGINLVA LGLASQLKAG DLILLDSAAH
HANIVPWQML AKQTGAEIRP IPLTPEARLD QAAYQALLQR GPRVVALSHV SNVLGTVNPV
REMIAQAKAV GALTLIDGAQ AIAHLEVDML ALDCDFYLFS GHKMYGPTGI GILYGRYEAL
DKLEPLLTGG EMIKQVSFEG TTFNILPNRL EAGTPPIAEV IGLGAAIDFI QSLPRAELRA
HEQALLKRLQ DELRALGGIS LYGAHGDNVG AVAFNLTGEH HQDVGILLDQ QGIAVRCGHH
CAMPLMQTLG LSGCCRASLG VYSNDEDVDR FIQALKSVKE LLL
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