Gene Shew_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0730 
Symbol 
ID4923135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp832089 
End bp832517 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID640162263 
Productprotein of unknown function DUF395, YeeE/YedE 
Protein accessionYP_001092861 
Protein GI127511664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAT CACTCGCTAT CGCCCTGTGC GGTGGTCTCT TGATTGGCTT GGCGGCAAGC 
CTGCTCCTGG TGGTTAACGG CCGCATCGCC GGTATCAGCG GTATTATTTC TGGCGCCCTG
TGGCGCCGCG GCTCGGGCCT GTTTGGCTGG CAGTTCTATT TTCTCGCGGG TCTGGTGCTC
AGTGGCCTGC TGCTGGCCGA GCCGTTAAAG GCCTGGCTGG CTATCGAACC AGTGGTGCTG
CGTGAGCTTG GTATAGCCGC GCCGACCCTG CTGCTATCGG CGCTACTGGT TGGACTCGGC
TGCAGCCTGG GTAACGGCTG TACCAGTGGC CATGGCATCT GCGGCATAGG TCGTCTGTCG
CCGCGCTCCA TCGCCGCGAC CCTGGTCTTC ATGCTGGTGG GTGTCATCGC CGCCGTGCTG
CTGAACTAG
 
Protein sequence
MFSSLAIALC GGLLIGLAAS LLLVVNGRIA GISGIISGAL WRRGSGLFGW QFYFLAGLVL 
SGLLLAEPLK AWLAIEPVVL RELGIAAPTL LLSALLVGLG CSLGNGCTSG HGICGIGRLS
PRSIAATLVF MLVGVIAAVL LN