| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0726 |
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| Symbol | |
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| ID | 4921575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 826091 |
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| End bp | 827575 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162259 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001092857 |
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| Protein GI | 127511660 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGA TTCTCATCGT CGACGACAAT CAGGCAGTAT GCAGCGCGCT CTCCCTGATG
CTCGAACTCA ATGGATTTAA GACCCTAACT TGTTTCTCCC CGGAGGAGGC ACTGGGCTTG
GTGGCTGAGC AGGAGATCGC CCTGGTGATC CAGGACATGA ACTTCACCCA GGACACCACC
TCGGGCGAGG AGGGCAAGCG CCTGTTCTAC GATATCCGTG CCTGCCAGCC CCAGCTACCC
ATCATACTCC TGACCGCCTG GACTCAGCTG GAGCTGGCGG TGGAGCTGGT GAAGGAGGGC
GCCGCCGACT ACATGGGCAA GCCCTGGGAC GATGATAAGC TGCTTAACAG CGTCAACAAC
CTGATTTCCC TCCACGCCCT GTCGCGGCAG AATTCGCAGC TGGCCCGCTC CGAGCACCAG
CGGATGTCGG CGATCAAGGA TGCCGATCTC TGTGGCATCG TCTTCGGCAG CGGCGCCATG
CAGCGCTGTA TCGATCTGGC GCTGCAGATA GCCAAGTCCG ACGTATCAGT GTTGATCACC
GGCCCCAACG GCGCCGGTAA GGACAAGCTG GCGGACATAC TGCACGCCAA CTCCCCCCTC
AAACATAAGC CCTTCATTAA GGTGAATATC GGCGCACTGC CGATGGAGCT GCTGGAGGCC
GAGCTGTTTG GCGCCGAGGC GGGCGCCTTC ACCGGCGCCA ACAAGGCGCG CATCGGTCGT
TTCGAGGCGG CCGACGGTGG CACCCTGTTT CTCGACGAGA TAGGCAACCT GCCGCTGTCG
GGTCAGGTGA AGCTGCTGCG GGTGTTGCAG ACCGGCGAGT TCGAGCGTCT GGGCAGCCAT
CAGACCCGTA AGGTCAAGGT GCGGGTGATC AGCGCCACCA ATGCGGATCT TGCCGAGGAT
ATCGCCAGCG GTCGTTTCCG CGAGGATCTC TTCTATCGCC TCAATGTGAT CGAGCTGGCC
TTGCCGCCTC TCAATCAGCG CCAGGACGAT ATCCTGCCCC TGGTGAATCA CTTCATCGGT
CAGGACTTTA GCCTGAGTAA GCCCACCCAG CAGGCGCTGG TGAGCTACCC TTGGCCGGGC
AATGTGCGCG AGCTGGAGAA CGCCTGTAAG CGGGCGGTGA TCCTGGCCGC CAGCCCCATG
CTGACCATGG CCGACTTTGG CTTGAAGCCT GTGAATGGTT TAAAGCCCGT GAGCGGCTTA
AATCCTGTGA GCGGCGCACC ATCGACCAGC TCGGTTTCTG CACCTAGCCC GGTAGCGTCG
CAACAGGCTC AGGAACAGAG ACAGAAACCT CGTTTCGCGG AGCAAGAGGT GGAAACTGAC
AGAGCACCCA CGGTTGATTC AGCTAGCCGC GGTGAGCCTA CTGGGGCCGA TATCGAGCTG
GCCCTGGCGG AGCATAATGG GGTGATCGCC CGGGTGGCCA AGTCCCTGGG GCTGAGCCGT
CAGGCGCTCT ATCGCCGCAT GGAAAAATTT GGGATCGAGA AATAA
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| Protein sequence | MDTILIVDDN QAVCSALSLM LELNGFKTLT CFSPEEALGL VAEQEIALVI QDMNFTQDTT
SGEEGKRLFY DIRACQPQLP IILLTAWTQL ELAVELVKEG AADYMGKPWD DDKLLNSVNN
LISLHALSRQ NSQLARSEHQ RMSAIKDADL CGIVFGSGAM QRCIDLALQI AKSDVSVLIT
GPNGAGKDKL ADILHANSPL KHKPFIKVNI GALPMELLEA ELFGAEAGAF TGANKARIGR
FEAADGGTLF LDEIGNLPLS GQVKLLRVLQ TGEFERLGSH QTRKVKVRVI SATNADLAED
IASGRFREDL FYRLNVIELA LPPLNQRQDD ILPLVNHFIG QDFSLSKPTQ QALVSYPWPG
NVRELENACK RAVILAASPM LTMADFGLKP VNGLKPVSGL NPVSGAPSTS SVSAPSPVAS
QQAQEQRQKP RFAEQEVETD RAPTVDSASR GEPTGADIEL ALAEHNGVIA RVAKSLGLSR
QALYRRMEKF GIEK
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