| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0723 |
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| Symbol | |
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| ID | 4920666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 822712 |
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| End bp | 823434 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162256 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001092854 |
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| Protein GI | 127511657 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACGA TGAAAAATAT CAACAAGGTG TTTAAAACGG ATTTGGTGGA AACCCATGCG
TTACGGGATT TCAATCTCGA GGTTAAGGAA GGTGAGTTTG TCGCCGTCAC CGGGCCGTCT
GGTTCGGGCA AGACCACCTT TCTCAACATC GCCGGCCTGT TAGAAGGCTT TACTAACGGC
GAATATCATC TGGACGATGT CAACATCTCT AACCTGAGCG ATAACAAGGC GGCCGCCATT
CGCAACGAGA AGATAGGCTT TATCTTTCAG GGCTTTAACC TGATCCCCGA CCTTAACCTG
GCGGAGAATG TCGAGGTGCC ACTGCGCTAT CGCGGCTTCA ACGCCAAGGA GCGTCAGCGC
CGCGTGAAGG CCGCGCTGGA GCAAGTGGGT CTGGGGGCAC GTATGAAGCA TCTGCCATCA
CAACTTTCCG GTGGTCAGCA GCAGCGTGTG GCGATTGCCC GCGCCCTGGC TGGCGAACCA
AGATTTCTCC TCGCCGACGA GCCAACAGGT AACTTGGACA GCCTGATGGC TCGTCAGGTG
ATGGAGCTTT TAGAAGAGAT CAACAAGGCG GGCACCACCA TCATCATGGT GACTCACGAT
CCCGAATTGG CGCGCCGCGC CCAGCGAAAC ATTCAGATCG TCGACGGTCA GGTGTGTGAC
TTCACCCTGT ACCAGGGCGG TCAGTCGCAC CTGGTCGATA CGGCCGAAAA AGTGGCCAGC
TAA
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| Protein sequence | MLTMKNINKV FKTDLVETHA LRDFNLEVKE GEFVAVTGPS GSGKTTFLNI AGLLEGFTNG
EYHLDDVNIS NLSDNKAAAI RNEKIGFIFQ GFNLIPDLNL AENVEVPLRY RGFNAKERQR
RVKAALEQVG LGARMKHLPS QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSLMARQV
MELLEEINKA GTTIIMVTHD PELARRAQRN IQIVDGQVCD FTLYQGGQSH LVDTAEKVAS
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