Gene Shew_0716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0716 
Symbol 
ID4923188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp816329 
End bp816877 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content64% 
IMG OID640162249 
Productcobalbumin biosynthesis enzyme 
Protein accessionYP_001092847 
Protein GI127511650 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2087] Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACC TGGTTCTAGG CGGCGCTCGC AGTGGCAAGT CTCGCCATGG CCTTTCCCTG 
GTGGCCGATT ATGTGGCAAG GGGTTATGAG TGCCTGTTTG TGGCCACCGC CCAGGGGCTG
GATGAGGAGA TGCGCGCGCG CATCGCCCGC CACCAGGATG AGCGCCGTGA GGATGGTTTG
TCCTGGCAGA CCCTGGAGTG TCCGCTACAC TTGAGTGCTT GTATCGAAAC TCACGCCAGG
GAGAAACGGG TGATCTTAGT CGATTGCCTC ACCCTCTGGC TCACCAATCA GTTACTCGAG
GGCGATGACT GGCCGCTCGC CAGGGCGGCG CTGCTGCGCG CCCTGGAAAC TGCGCCCGGG
GCTGTCGTGC TGATCAGCAA TGAGGTGGGC TGCGGCGTGG TACCGGCCGA CCCCTTGAGT
CGCCGCTTCG TCGACGAGGC GGGTTGGCTG CATCAGGCGA TAGCTCAGCG AGCCCAGCAG
GTGGTCTTGG TCACCGCCGG TCTGCCGCTG ATCCTCAAGG ATGAGACGAG CCAGGGCGCC
AAGGAATAG
 
Protein sequence
MMHLVLGGAR SGKSRHGLSL VADYVARGYE CLFVATAQGL DEEMRARIAR HQDERREDGL 
SWQTLECPLH LSACIETHAR EKRVILVDCL TLWLTNQLLE GDDWPLARAA LLRALETAPG
AVVLISNEVG CGVVPADPLS RRFVDEAGWL HQAIAQRAQQ VVLVTAGLPL ILKDETSQGA
KE