| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0714 |
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| Symbol | cobT |
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| ID | 4922612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 814495 |
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| End bp | 815523 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640162247 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001092845 |
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| Protein GI | 127511648 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAG TCACTGTGGT AAGTAGCGAG TTCGATGCCA AGATCCAGCA GAAGATAGAC
ACTAAGACCA AGCCACTGGG CGCCCTCGGC GCGCTCGAGA CCCTGGCGAT GACTATCGCC
AGGGTGCTGG GTCCAGACAA GCCGCAGATA ACCAAACCAA CCCTCTTGGT GTTTGCCGGC
GATCACGGCA TCGCCGCCTC CGGCGTCTCC ATCGCGCCCA GCGAGGTGAC TACCCAGATG
GTGATGAATT TCCTCAAGGG CGGCGCGGCC ATCAATCTGT TCTGTGCCCA GGGGGGGATC
ACCATGGAGG TGATCGACTG CGGCATCGCC CAGGAGATCC ATGATCAGCC TAAGCTTATC
AATCACAGGC TGGGGGCCGG CACAGGTGCG ATTCATCGCG AGCCCGCCAT GACCCTGGGG
GCGGTCAAGC AGGGCTTCGC CATGGCCAGG GAGCGGGTCG CGCTGCATCA CGGCCGCGGT
TGTAACCTAA TAGCCTTCGG TGAGATGGGC ATAGGTAACA CCAGCTCGGC GGCGGCCATC
ATGGCGGCGC TGATGGGGCG CGAGGCGGCC GAGTGTGTCG GTCGAGGAAC TGGCATAGAT
GCCGCCACCC TGGCACGCAA ACAGCTGCTG GTGGAGCAGG CGCTGTTTTT GCACCGTGAG
CAACTGGGAG ATCCATATGG CGTATTGGCC TGCCTGGGTG GCTTCGAGAT AGTGCAGATG
ACCGGCGCCA TATTGGCGGC GGCCGAGCTG AAGATGCTGG TGCTGATCGA CGGCTTCATC
GCCACGGCGG CGGCCCTGGC AGCGGTGACT ATCGCGCCTC ACGCCCGGGA CTATATGATC
TTCGCCCACG AGTCCGGCGA GCGCGGCCAC AAGCTGATGC TGGAGCATCT CAATGCCCAG
CCGCTCTTGT CCCTCGGACT ACGTCTCGGT GAGGGAACCG GGGCGGCGCT GGCTGTGCCC
CTGGTGCAGG CGGCGGCCAC GTTTTACAAC GAGATGGCCT CCCTCGAAGA GATGGGCATT
TCGATTTAG
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| Protein sequence | MFEVTVVSSE FDAKIQQKID TKTKPLGALG ALETLAMTIA RVLGPDKPQI TKPTLLVFAG
DHGIAASGVS IAPSEVTTQM VMNFLKGGAA INLFCAQGGI TMEVIDCGIA QEIHDQPKLI
NHRLGAGTGA IHREPAMTLG AVKQGFAMAR ERVALHHGRG CNLIAFGEMG IGNTSSAAAI
MAALMGREAA ECVGRGTGID AATLARKQLL VEQALFLHRE QLGDPYGVLA CLGGFEIVQM
TGAILAAAEL KMLVLIDGFI ATAAALAAVT IAPHARDYMI FAHESGERGH KLMLEHLNAQ
PLLSLGLRLG EGTGAALAVP LVQAAATFYN EMASLEEMGI SI
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