Gene Shew_0711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0711 
Symbol 
ID4922447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp811422 
End bp812033 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content61% 
IMG OID640162244 
Productphosphoglycerate mutase 
Protein accessionYP_001092842 
Protein GI127511645 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAA CGACACTCTA TTTGATGCGG CACGGCGAAT GTGAAGGCGG CAACTTGCTG 
CGCGGACATA GCGATCAACC TCTCACCGAG ATAGGCTTCG CCCAGATGCA GCTGGCCTAT
GCCAAGCTGC CCCAGGCGGT GGACAGGGTG ATCAGCTCGC CGCTCAAGCG TTGCCGTGTA
TTTGCCGAGC ACCTCACCGC TAAGAATCAG GTGAAGGTGG CCCTGGATGC CGGGCTCAAG
GAGATCTACT TCGGCCGTTG GGATGGCCAG CCTATCCCTG AGCTGCATGC CGATCACGGT
GAGGAGCTGA GTGCCTATTG GCGGGACCCT TGGGCCAATT CGCTGCCCGA GGGGGAGCCC
ATGGCTGAGT TCGAGCAACG TGTCGACGAG GTGGTCGAGC AGTTGGTGCA TCAGCATTGC
GGCGAGGCCT TGTTACTGCT CACTCACGGC GGCGTGATAC GTCACCTGAT GGCCAAGGCC
CTGGGGGTAG AGCGCGCCGT AGGCTTCTAT ACCCGGCTGA GCCTGGACTA CGGCAGCGTG
GTCAAGATAA GCCATTACCG CGACAAGGCG GGAGAGGGCT ACTGGCGTCT GCATTGGCAC
GACGCCGAGT GA
 
Protein sequence
MTQTTLYLMR HGECEGGNLL RGHSDQPLTE IGFAQMQLAY AKLPQAVDRV ISSPLKRCRV 
FAEHLTAKNQ VKVALDAGLK EIYFGRWDGQ PIPELHADHG EELSAYWRDP WANSLPEGEP
MAEFEQRVDE VVEQLVHQHC GEALLLLTHG GVIRHLMAKA LGVERAVGFY TRLSLDYGSV
VKISHYRDKA GEGYWRLHWH DAE