| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0708 |
|---|
| Symbol | |
|---|
| ID | 4923811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | - |
|---|
| Start bp | 801959 |
|---|
| End bp | 802786 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640162241 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001092839 |
|---|
| Protein GI | 127511642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTCA CACTCACCCC GAGCAATGCG CTCGAAACCG CCCTGCAGGC GGCACTTGCC
GATCACACCC AGGCCAAAGC CCTCTATGAA CAGCTGATCA AGGCCAGGCT CTACCTGCTG
AGCGATGGCC AAGAAGCTCC TCAGGCCGAT GGCACCACTG AGCTCTCCAT CATGCAATGG
CACATTCCCG TCAGCGATGA TCAGGTGCAC TACTTCGTCC CGCTGTTTAC CTCCCAGGAG
GCAGTCGATC AGGCCAAGGC CATAATGGAG AGTGAGGGCA GCGAATTTCA CGGTCAGATT
GAGATAGATG CGCCTCAGGC ATTTCAGCTG CTGCTGAGCA ACCAGATGGA TATGGCACTC
AACCCCAATA GCAATCTATC GAAAGTCGTC AGCAGCGATG AGATCCGCTA TATGTTGCTG
CCCGACATGG CGCTACTCCC CCAGGGCAAT CAGCTCCTGC TGCTGGGCAA GGTTCTTGAT
GATGGGCTGC CCATGTTTGG CGCGGTGCAC CAAATATTGG CTAACTACCC CAGCGTCAAG
GCGGGCTATT TCATCGAGTC ATGCGAGCTG GATATCCGCC GCGGCGGCAC AGACAGCGCC
TTCACCCTGG CGCTCACCTT GGAGGGAGAC AGGATTAGCG ATGATTTCAG CCGCATTCGC
AGCGATTGCC GCAACCTACA TAGAGAGATT GAGCTTCATG GCTGGGAGAT ACGCCCCTAC
CTGCTGAGAA GTGACAAACA TGATGAGATA AGCGACTTTT GCCTGAAGAA GCTTGAGCCC
TTCTATCGCC CTTCGCTGCT GAGCAAATTC AAGACCTGGT TTAGCTGA
|
|---|
| Protein sequence | MEVTLTPSNA LETALQAALA DHTQAKALYE QLIKARLYLL SDGQEAPQAD GTTELSIMQW
HIPVSDDQVH YFVPLFTSQE AVDQAKAIME SEGSEFHGQI EIDAPQAFQL LLSNQMDMAL
NPNSNLSKVV SSDEIRYMLL PDMALLPQGN QLLLLGKVLD DGLPMFGAVH QILANYPSVK
AGYFIESCEL DIRRGGTDSA FTLALTLEGD RISDDFSRIR SDCRNLHREI ELHGWEIRPY
LLRSDKHDEI SDFCLKKLEP FYRPSLLSKF KTWFS
|
|---|
| |