Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0675 |
Symbol | |
ID | 4921339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 768423 |
End bp | 769868 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640162208 |
Product | hypothetical protein |
Protein accession | YP_001092806 |
Protein GI | 127511609 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0234348 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGA AATTAACCAC CTTAGGGATG GCTATCGCCG GCTTGCTGGC GGGCAATGCC TATGCCGACA CTCAACTAAA TAACACAACC AATACCGCGA CCAATACCGC CACCTTAGCC GAGTCGATCG CCAGGCAGGA GCAGGCGCTT ATTCAGCTGA AACAGGAGCT GGCCCAGCTT AAGGCGCAGC AGGCCGACAA ACAGGTAGAG AAACAGGCCG AGCAACAGAT TGATCGACAG GCGCTGACCA AGGCGGTACA GGAGCAGGTT GCCCTGGAGG CCGCAAACAG CCCCTGGAGC CGCTTCAAGT TTGAATCCTA CGGCAGCATG AATTACACCA GCGACGAGTA TTTCGATAAC GTGCAGGACA CCTCGCCCGA GCGTCGCGGC CGCCTGGATC TGGAGCGGAT CGTCACCGAA TTTGGCTACC AGTTCAACGA CGAGTGGGAC ATGGAGGTGG AGATCGAATA TGAACATGGC GGCACGGGCA GCGCTCTGGA ATATGACGGT TTCGACGAGT TCGGCGAGTT CGAGTCGGAG GTCGAGGCCG GCGGCGAGGT GATGATCGAG AAGGCCCAGC TCAGGTATCG CCCGAGTAAA GCCTTCGGCG TCAAGTTCGG AAACATACAT CTACCGGTGG GCCTTTCCAG CGTGCTGCAT AAGCCTAACC AATACCTGAC CGTGCTGCGT CACCGCAGCG AGGCGGCCAT GTTGCCCGCC GTGTGGAACG AGACGGGTAT CGGCATCTTC GGCGACCTGG GGGATTTCCA CTATCAGGCT CAGGTGGTCA GCGGCCTCAA CTCTGAGTAT TTCCGCACCT ACGACTGGAT AGCTTCCGGT CATCAGAAGC GCTTCGAGCA CATCAACGCC GACGAGCTGG CCTATGTGCT GCGTCTCGAT TACGGCAGCT TCAAACAGCC AGGCCTGGCA CTGGGCGTCG CCTACTACTA TGGCAACACC AGCGGTAATC GCCACAAGAG CAACAAGCTG GCCGGTGACG GCAGCGTGAG CCTGCTGGCG CTTTCCGGTG CCTATGTGGA CGGCCCCTGG ATACTGCGCG GACAGTACCT GCAGGGCACC CTGGATGATG CCGATGCGAT CACTCAGGCC AACAAGACCA CCCCGGGCCT CAAGCCTGGC AACTTCGCCC AGCTGGGCAG CAAGGCAGAG TCTTTCTTCG TCGAGGCGGG GCTGGATCTC AACCACTTCT TCTCTGTGCC GCTGACTGTG TTTGCCAACC TGGATTATGC CAACCCGCTG AGCGAGGTGG AAACCGGTGC GGCCACCAAG CGCTATGAGA ACACCTGGAC CAGCGTCGGC ATCAACTACT CACCGATCCC CGAGATAGTG ATCAAGGCCG AGGGCGGCCT GCATCAGGTG GCGGTGGCTG CCATCCCGGA TACCCATTTC TTTGCCCTAG GCGTGGGCTA TCAATTCTCG CTCTAA
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Protein sequence | MTLKLTTLGM AIAGLLAGNA YADTQLNNTT NTATNTATLA ESIARQEQAL IQLKQELAQL KAQQADKQVE KQAEQQIDRQ ALTKAVQEQV ALEAANSPWS RFKFESYGSM NYTSDEYFDN VQDTSPERRG RLDLERIVTE FGYQFNDEWD MEVEIEYEHG GTGSALEYDG FDEFGEFESE VEAGGEVMIE KAQLRYRPSK AFGVKFGNIH LPVGLSSVLH KPNQYLTVLR HRSEAAMLPA VWNETGIGIF GDLGDFHYQA QVVSGLNSEY FRTYDWIASG HQKRFEHINA DELAYVLRLD YGSFKQPGLA LGVAYYYGNT SGNRHKSNKL AGDGSVSLLA LSGAYVDGPW ILRGQYLQGT LDDADAITQA NKTTPGLKPG NFAQLGSKAE SFFVEAGLDL NHFFSVPLTV FANLDYANPL SEVETGAATK RYENTWTSVG INYSPIPEIV IKAEGGLHQV AVAAIPDTHF FALGVGYQFS L
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