| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0672 |
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| Symbol | |
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| ID | 4923477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 765289 |
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| End bp | 766110 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640162205 |
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| Product | uroporphyrin-III C-methyltransferase |
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| Protein accession | YP_001092803 |
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| Protein GI | 127511606 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00608831 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAACTAT TTACTCTACC CGGGCAACAG GCACAGGGCA AAGTCTGGCT TGTGGGCGCC
GGTCCTGGCG ACATTGAGCT ATTAACGCTC AAGGCCTACC GCATCCTGAA GAAGGCCGAT
GTGGTCTTGT TCGACGCCCT GGTGAGCGAA GAGATCCTGG CTTTAGCGCC GAAAGAGGCG
GAGTTGATCG CCGTGGGCAA GCGCGCCGGT AAACACAGCG CCGCCCAGGA GGAGATCAAC
CAGCTGTTGG TGACCAAGGC CTATACCCGC AAGAACGTGG TACGCCTCAA GGGGGGCGAC
CCCTTCATCT TCGGCCGTGG TGGCGAAGAG CTGGAGACCC TGGTCGAGGC CGGGGTGGAG
TTCGAGGTGG TGCCTGGCAT CACGGCGGCC AGCGGCACCT CTGCCTACGC AGGTATTCCC
TTGACCCACA GGGATCATGC CCAGGGAGTC AGCTTTATTA CCGGTCACTG CAAGTTGGAG
AGTCGTCCCA TGGACTGGCA GTCCTATGCC AACAGCGCCA ATACGCTGGT GGTGTATATG
GGGATCCTCA ACGCCGCCAG CATTCAACAT GGACTTATCT CGGCCGGGCG CTCGCCCAAG
ACGCCGGTGG CCATTGTCTC AAAGGCGACC ACGGCGGCGC AGCAGCGATT TATCGGCACC
CTAGGTGAAC TGGCGGAACT GGCGGCGGAT CCGGCACTGG AGATGCCGGC GCTGATGATC
ATAGGTGAGG TGGTTGGCCT GGCCGATAGC CTGCACTGGT TCAACCCAGA GACCAGCCCT
AAGACCCTGG ATGCGGCGCT GAAGCAGTCG CTGGGCCAAT AA
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| Protein sequence | MELFTLPGQQ AQGKVWLVGA GPGDIELLTL KAYRILKKAD VVLFDALVSE EILALAPKEA
ELIAVGKRAG KHSAAQEEIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LETLVEAGVE
FEVVPGITAA SGTSAYAGIP LTHRDHAQGV SFITGHCKLE SRPMDWQSYA NSANTLVVYM
GILNAASIQH GLISAGRSPK TPVAIVSKAT TAAQQRFIGT LGELAELAAD PALEMPALMI
IGEVVGLADS LHWFNPETSP KTLDAALKQS LGQ
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