| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0667 |
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| Symbol | |
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| ID | 4923641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 758921 |
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| End bp | 759673 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162200 |
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| Product | phosphoadenosine phosphosulfate reductase |
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| Protein accession | YP_001092798 |
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| Protein GI | 127511601 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000389799 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATAATT CAGTGATCTC TGCCCAGGCG CTGCAAGCAT TGCTTAGCGC GCCCAAGGCG
GAGCAAGACG CAGAGCTGGC TCGAGTCAAC GCCTTCCTGG CGGGACTCAC GCCCGCCGAG
CGGGTGATCT GGGGCCTGGC TTACCTGCCG GGCACCCATG CGCTGTCGTC GAGCTTTGGT
ATTCAGGGCG CCGTAATGCT GCATCTGGTC ACCCAGGTAC AGCAGGATAT TCCGGTGATC
CTCACGGACA CTGGCTATCT GTTTCCCGAG ACCTATCACT TTATCGACGA GCTGACCGAG
CGACTCAAGC TTAATCTTAA GGTGTACCGC GCGCCTATGA CCAGCGCCTG GCAGGAAGCC
CGTTTCGGTC GCCTGTGGGA GCAGGGGCTG GATGGCCTGG AGCAATACAA CCGCCTCAAC
AAGGTGACTC CTATGCAGAC GGCGCTCAAG GAGTTGGAGG TTGGCACCTG GTTTGCGGGC
CTGCGCCGAA GCCAGTCCAG CACCCGTGAG GATCTGCCGA TTCTGGCGAT CCACGGTGAT
CGCTATAAAC TGCTGCCGAT CCTGGAGTGG AGCAACAAGG ATGTGCATGA GTATCTCACC
AAGCATGACC TGCCATACCA CCCGCTTTGG GAGCAGGGCT ATGTGTCGGT TGGCGATACC
CATTCGAGTC GCCCGCTGGA GCTGGGGATG ACCGAAGAGG AGACCCGCTT CAACGGCCTC
AAGCGTGAGT GCGGCCTGCA CTATGAGATC TAA
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| Protein sequence | MDNSVISAQA LQALLSAPKA EQDAELARVN AFLAGLTPAE RVIWGLAYLP GTHALSSSFG
IQGAVMLHLV TQVQQDIPVI LTDTGYLFPE TYHFIDELTE RLKLNLKVYR APMTSAWQEA
RFGRLWEQGL DGLEQYNRLN KVTPMQTALK ELEVGTWFAG LRRSQSSTRE DLPILAIHGD
RYKLLPILEW SNKDVHEYLT KHDLPYHPLW EQGYVSVGDT HSSRPLELGM TEEETRFNGL
KRECGLHYEI
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