| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0666 |
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| Symbol | |
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| ID | 4922672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 757231 |
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| End bp | 758928 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162199 |
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| Product | sulfite reductase subunit beta |
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| Protein accession | YP_001092797 |
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| Protein GI | 127511600 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000528094 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGACC AGAAATTATC AGTAAACGAG TACCTAAAGA CCGACAGTAA CTACCTGCGC
GGCACTATCG AAGAGGGGTT AGACACCTCG CTGACCGGTG CCTTCAACGA CGCAGATCAG
CAGCTGATCA AGTTCCACGG TTTCTACCAG CAGGACGACC GCGATCTGCG TAACGAGCGT
AAGGAGCAGA AGCTAGAGCC TCTCTACAGC TTCATGCTGC GTGCCCGTGT GGCCGGTGGT
GTCTGTACGC CTAAGCAGTG GCTAGGAGTA GATAAGATAG CCTCGACCCT GACCAGCTCC
AACAGCATTC GTCTGACGAC CCGCCAGACC TTTCAGTATC ACGGCATCCC TAAGCGTAAT
CTCAAGACGC TGATCCAGGA TCTGGATAGA GAGGCGCTGG ACTCTATCGC CGCCTGTGGC
GACGTGAACC GTAACGTCAT GTGTAACCCT AACCCGGTAG AGTCCAAGCT GCATCAGCAG
GCCTACTACT GGGCCAAGAA GCTGTCGGAC AATTACCTGC CACGCACCAA GGCCTACGCC
GAGATCTGGC TGGGTGACGA CAAGGTGGCG GTGAGCGAGA GCGAAGAGGT GGAGCCTGTC
TATGGCAAGA CCTATCTGCC CCGTAAGTTC AAGATGGCCG TGGCCGTGCC GCCGGATAAC
GATGTAGATG TCTACACCAA CGACCTTGGC TTCATCGCCG TGGCCGAAGA TGGGGAGCTG
GTAGGCTTTA ATATGGTGGC CGGTGGCGGC ATGGGCTCGA CCCATGGCGA GGTCGCGACC
TTCCCGCGTC TGGGTGACGA CTTTGGTTTC ATCAAGGCCG AAGACTGCCT GAAATTTGCC
GAGGCCGTGC TCAAGGTGCA GCGTGACTGG GGTAACCGCT CAGATCGTAA GCAGTCGCGC
CTCAAGTACA CCATAGTCAA GCATGGTTTT GAGGCCTTCA AGGCAGAAGT GGAGCAGCGC
GCCGGGGTAA AATTTGAGCC TAAGCGTGAG GTGGTGATCG GCGATCGCGG CGATCGTTAC
GGCTGGATCA AGGGGGTGGA TAATAACTGG CACCTGACCC TGTTTATCGA GGGGGGCCGT
ATCAAAGATC TGCCGGGACA ACCGCTGCAG ACCGGCCTGC GTGAAATTGC CCTGGTACAC
AAGGGTGATT TTCGCATGAC AGCCAACCAG AACATCATCA TCGCCGGTGT GGCCGAAGAA
GATAAGGCGC AGATCGAGGC TCTTGCCCGC AGTCATGGCC TGATGGGTAA GTTGATAAGC
CCGACTCGTG GTCATTCCAT TGCCTGTGTG GCGCTGCCGA CCTGTGCCCT GGCGATGGCC
GAGGCCGAGC GTTACTTCCC AGATTTCATG ACCAAGGTGG AGGCACTGCA GGAGAAGCAT
GGCTTCCTGG AGCAACCGAT AGTGATCCGC ATGACGGGCT GTCCTAACGG CTGTGCCCGT
CCCTTCGCCG CCGAGATTGG CCTGGTGGGT AAGGCGCCGG GTCGATACAA CCTCTATCTG
GGGGCGAGTT TCGAGGGGAC GCGCCTCAAT AAACTCTACC GCGAGAACAT TCAGGAAGCC
GAGATTCTGG CGGCCCTGGA CGAACTGTTT GCCCGTTACG TCAAAGAGCG TGAAGCAGGC
GAAACCTTTG GTAACTTCAC CGTGCGTGTC GGCGTGGTGA AGGCGGTTAT CGATGCCGCT
AAGGATTTCC ATGGATAA
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| Protein sequence | MSDQKLSVNE YLKTDSNYLR GTIEEGLDTS LTGAFNDADQ QLIKFHGFYQ QDDRDLRNER
KEQKLEPLYS FMLRARVAGG VCTPKQWLGV DKIASTLTSS NSIRLTTRQT FQYHGIPKRN
LKTLIQDLDR EALDSIAACG DVNRNVMCNP NPVESKLHQQ AYYWAKKLSD NYLPRTKAYA
EIWLGDDKVA VSESEEVEPV YGKTYLPRKF KMAVAVPPDN DVDVYTNDLG FIAVAEDGEL
VGFNMVAGGG MGSTHGEVAT FPRLGDDFGF IKAEDCLKFA EAVLKVQRDW GNRSDRKQSR
LKYTIVKHGF EAFKAEVEQR AGVKFEPKRE VVIGDRGDRY GWIKGVDNNW HLTLFIEGGR
IKDLPGQPLQ TGLREIALVH KGDFRMTANQ NIIIAGVAEE DKAQIEALAR SHGLMGKLIS
PTRGHSIACV ALPTCALAMA EAERYFPDFM TKVEALQEKH GFLEQPIVIR MTGCPNGCAR
PFAAEIGLVG KAPGRYNLYL GASFEGTRLN KLYRENIQEA EILAALDELF ARYVKEREAG
ETFGNFTVRV GVVKAVIDAA KDFHG
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