| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0664 |
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| Symbol | |
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| ID | 4922567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 753868 |
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| End bp | 755037 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162197 |
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| Product | NAD(P) transhydrogenase subunit alpha |
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| Protein accession | YP_001092795 |
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| Protein GI | 127511598 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.296858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00128428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAACTAG GTCTACCTAA AGAGAGCCAT GCCGACGAAA AACGCGTTGC GTTGATCCCG
GCCAATGTGA CTCGGTTAAT CAAAAAAAAC CTCCAAATTC TCGTGGAGAG CGGAGCGGGT
CTCGCTGCGG GCTTTAGCGA TCAAGCCTAT CAGGAAGCGG GAGCCGTTAT TGCCAACAGA
GACGAGGTAC TCGGCGCCGA TATCATCACC CTGGTCAACC TCAAGGGTGA GCAGTTCGAG
GAGATCAAGG CCAAGGCGAA GCCCCAGCAG CTGTTTATCG GCATGATGGA TCCCCTGGCG
CAACCGGAAA ATGCCGCCGC CCTGGCCCAA ACAGGCACCA GCGCGTTGGC ACTTGAGCTG
GTACCGCGGA TCACCCGCGC CCAGAGCATG GATATCCTCT CCTCCATGGC CACCATCGCC
GGTTACAAGG CCGTGTTGCT GGCCGCCCAT GAGGCGCCGC GCATGTTCCC TATGATGATG
ACGGCCGCCG GCACACTCAA ACCCGCCCGC GCCTTCATCA TGGGCGTCGG CGTCGCCGGC
CTACAGGCCT GTGCCACCGC CAAACGCCTG GGTGCCGTGG TGGAAGCTTA TGATATTCGC
CCGGCCGCCC GGGAGCAGAT CCTCTCTGTA GGTGCCAAAC CGGTTGAGCT GGATCTGGAA
ACCGAGAACA CAGAGACCAA GGGTGGTTAC GCCGCCGAGC AGAGCGATGA CTTTATCAAG
CGTCAGCAGC AGGCGATGGC CAATGTGCTG GCCCAGCAGG ATATCGTCAT CACCACGGCC
GCGATCCCAG GCCGCAAGGC GCCCGTACTG ATCACCAAGG AGATGGTGGA TGCCATGAAA
CCTGGCACGG TGATTGTCGA CCTTGCCGCC GAAACCGGCG GTAACTGCGA GCTGACGGAG
CTGGACCAGA CAGTTGTCCA TAACGGCGTT ACCATACTCG GGCCATCAAA TGTGCCGGGC
AGCGCCGCGA CCCACGCCAG CCAGATGTAT GGCACCAACA TAGAGAACCT GCTCAAACTG
ATCGTCGACA ATGAAGGCCA GTTAAACCTG GATTTCGACG ACGAGATTGT CCGCGACACA
GTCGTGGCCC ATCAGGGTGA GGTGGCTAAC GCCAGATTAC GCGACCTGTT ATCACTGCCG
CCACTGGCGG CAACAGAGGA GGCTCAATAA
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| Protein sequence | MKLGLPKESH ADEKRVALIP ANVTRLIKKN LQILVESGAG LAAGFSDQAY QEAGAVIANR
DEVLGADIIT LVNLKGEQFE EIKAKAKPQQ LFIGMMDPLA QPENAAALAQ TGTSALALEL
VPRITRAQSM DILSSMATIA GYKAVLLAAH EAPRMFPMMM TAAGTLKPAR AFIMGVGVAG
LQACATAKRL GAVVEAYDIR PAAREQILSV GAKPVELDLE TENTETKGGY AAEQSDDFIK
RQQQAMANVL AQQDIVITTA AIPGRKAPVL ITKEMVDAMK PGTVIVDLAA ETGGNCELTE
LDQTVVHNGV TILGPSNVPG SAATHASQMY GTNIENLLKL IVDNEGQLNL DFDDEIVRDT
VVAHQGEVAN ARLRDLLSLP PLAATEEAQ
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