Gene Shew_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0641 
Symbol 
ID4923872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp730107 
End bp730451 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content54% 
IMG OID640162174 
Producthypothetical protein 
Protein accessionYP_001092772 
Protein GI127511575 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CCACACTGAA AACCCCAAAC GGACAGGCGA TCACCGAAGT CTTCGTGGCC 
GATACTCCCT GGCTCAGACT CAGAGGACTG TTAGGTCGTC GCCCCCTCTC TCACGAGCAG
GGGATGCTTA TCGCTCCCTG CAGCTCGGTG CATACCCTGG GGATGCGCTA TGCGCTGGAT
ATCGTCTACC TCAATAAAAA CAACAAGGTG CTTAAGATCA CCCGAAATCT TAAGCCCTGG
CGCAGCAGTG CTTGTCGAGG TGCCACCCAG GTTTTGGAGC TGGCGGCAGG CAACTCCACC
CACAAACAGA TAAAACCCGG AGATATTTTG ACATGGGCAA ACTAA
 
Protein sequence
MKKTTLKTPN GQAITEVFVA DTPWLRLRGL LGRRPLSHEQ GMLIAPCSSV HTLGMRYALD 
IVYLNKNNKV LKITRNLKPW RSSACRGATQ VLELAAGNST HKQIKPGDIL TWAN