| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0640 |
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| Symbol | |
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| ID | 4923830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 729637 |
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| End bp | 730119 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162173 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001092771 |
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| Protein GI | 127511574 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAAAC TAATACGCCT CTCGCTATTC GTCGCCGTTA CCGCGCTACT CGGCGCCTGT
TCGACTACGC CTCAGAAGCC TGAGCACAAG GGCAATGAGC AGATCATGGC GATTCAGTCT
CAGGCGGAGC ATGCCTACAA ACTGGCCATG TTGGATCAGG CGGAGAGCCT CTATCTCGAG
GTGCTAAAGA GCGTACCTAA CTATGCGCCC GCCTGGTTTC GCCTGGGTAA CATCTATACC
CGTACCAACC GTCATGAAGC GGCCATCGCC GCCTATCGAC GCTGCATCGA GCTAGAGCCA
AATAACCAGA AGGCCTGGTA CAACATGGGA TTGGTGCGTA TCAAGCAGTC CACCAATGCG
CTCAATACCG CCAGCAACCA GGGCGATGCC GACTCTGCCG TGGGCCGTCA AATCAAGGCG
CTGCTCGACG CCCTCAATCA GCTGCAGAGC CAGCCACAAA CGACGGCACA GGCGGGGCTA
TGA
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| Protein sequence | MGKLIRLSLF VAVTALLGAC STTPQKPEHK GNEQIMAIQS QAEHAYKLAM LDQAESLYLE
VLKSVPNYAP AWFRLGNIYT RTNRHEAAIA AYRRCIELEP NNQKAWYNMG LVRIKQSTNA
LNTASNQGDA DSAVGRQIKA LLDALNQLQS QPQTTAQAGL
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