Gene Shew_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0620 
Symbol 
ID4923606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp705768 
End bp706562 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content55% 
IMG OID640162153 
Production transport 2 domain-containing protein 
Protein accessionYP_001092751 
Protein GI127511554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA GAAAGCGCTG GCTTCTGCCC ATCAACCAGA ACCCCACTCC CTTCGAGCTG 
GCGATGATGC TGCTCTCCCT GATCTCTGTC ATCGTGGTGC TCATGTTGAC CTTCGCCAAG
CTGGATGGCG AGACCCGTCG CCTACTCTTC TTCATCGACA CCAGCATCTG CGTCATCTTC
ATCAGCTACT TCTTTATCAA CCTGTTTCGC GCCGAAGATA AGCGTGACTA CTTCAGGCAC
CACTGGATCG ACCTGGTGGC CAGTATCCCC GCCATCGAAG CCTTGAGGCT GGCCCGTTTC
TTCCAGATTT TGCGGGTGAT CCGTCTGATC CGCATGACCC GCTCTATCCT GATCCCCCTG
ATGCGCCAGC GCCAAGAGAC CACCCTCGCC AGCCTGTTGG TGGCCATGGT GACCATACTC
ACCCTCGCCT CGGTAATGAT TCTGTTGGTG GAGAGCGGCG ACCCAAATGC CAATATCCAC
ACCGCAGAAA ATGCCATCTG GTGGGCGCTG GTGACCATCT CTACCGTAGG TTACGGCGAC
TATTATCCTG TCACCACAAT AGGCCACTTC ATCGGCGGCC TGGTGATCGT CTGTGGGGTG
AGCTTCTTCG GGGTGATCTC GGGTTACATG GCCTCTATCT TCATCGCACC AGACAGCAAG
CAGCGACAGG AGGCCCAGAG CCAACAGATG CGTGATGAGT TAGAGATGGT ACTGCAGCGA
ATGGAGAAGA ATCAGGAGAC CCTGCTGTCG GAAATTGCGA CGCTAAAGCA GCAGTTAAAT
GAGAAAAATA AGTAA
 
Protein sequence
MIDRKRWLLP INQNPTPFEL AMMLLSLISV IVVLMLTFAK LDGETRRLLF FIDTSICVIF 
ISYFFINLFR AEDKRDYFRH HWIDLVASIP AIEALRLARF FQILRVIRLI RMTRSILIPL
MRQRQETTLA SLLVAMVTIL TLASVMILLV ESGDPNANIH TAENAIWWAL VTISTVGYGD
YYPVTTIGHF IGGLVIVCGV SFFGVISGYM ASIFIAPDSK QRQEAQSQQM RDELEMVLQR
MEKNQETLLS EIATLKQQLN EKNK