Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0620 |
Symbol | |
ID | 4923606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 705768 |
End bp | 706562 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640162153 |
Product | ion transport 2 domain-containing protein |
Protein accession | YP_001092751 |
Protein GI | 127511554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATA GAAAGCGCTG GCTTCTGCCC ATCAACCAGA ACCCCACTCC CTTCGAGCTG GCGATGATGC TGCTCTCCCT GATCTCTGTC ATCGTGGTGC TCATGTTGAC CTTCGCCAAG CTGGATGGCG AGACCCGTCG CCTACTCTTC TTCATCGACA CCAGCATCTG CGTCATCTTC ATCAGCTACT TCTTTATCAA CCTGTTTCGC GCCGAAGATA AGCGTGACTA CTTCAGGCAC CACTGGATCG ACCTGGTGGC CAGTATCCCC GCCATCGAAG CCTTGAGGCT GGCCCGTTTC TTCCAGATTT TGCGGGTGAT CCGTCTGATC CGCATGACCC GCTCTATCCT GATCCCCCTG ATGCGCCAGC GCCAAGAGAC CACCCTCGCC AGCCTGTTGG TGGCCATGGT GACCATACTC ACCCTCGCCT CGGTAATGAT TCTGTTGGTG GAGAGCGGCG ACCCAAATGC CAATATCCAC ACCGCAGAAA ATGCCATCTG GTGGGCGCTG GTGACCATCT CTACCGTAGG TTACGGCGAC TATTATCCTG TCACCACAAT AGGCCACTTC ATCGGCGGCC TGGTGATCGT CTGTGGGGTG AGCTTCTTCG GGGTGATCTC GGGTTACATG GCCTCTATCT TCATCGCACC AGACAGCAAG CAGCGACAGG AGGCCCAGAG CCAACAGATG CGTGATGAGT TAGAGATGGT ACTGCAGCGA ATGGAGAAGA ATCAGGAGAC CCTGCTGTCG GAAATTGCGA CGCTAAAGCA GCAGTTAAAT GAGAAAAATA AGTAA
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Protein sequence | MIDRKRWLLP INQNPTPFEL AMMLLSLISV IVVLMLTFAK LDGETRRLLF FIDTSICVIF ISYFFINLFR AEDKRDYFRH HWIDLVASIP AIEALRLARF FQILRVIRLI RMTRSILIPL MRQRQETTLA SLLVAMVTIL TLASVMILLV ESGDPNANIH TAENAIWWAL VTISTVGYGD YYPVTTIGHF IGGLVIVCGV SFFGVISGYM ASIFIAPDSK QRQEAQSQQM RDELEMVLQR MEKNQETLLS EIATLKQQLN EKNK
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