| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0613 |
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| Symbol | |
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| ID | 4921433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 693986 |
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| End bp | 695749 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162146 |
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| Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
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| Protein accession | YP_001092744 |
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| Protein GI | 127511547 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA CCCTCGAAAA AGTCCTCGGC CGCTGGCTTA AGCAGCAAAA ATCGGCCTGT
GGCGCCTACC TCAATCTGAC CGTGTTGATT GGCGTGCTTA CCGGCTTCGC CCTGGTGGCC
CAGGCCTATC TGCTGGCGAC TATGCTCCAC GGCCTGATCA TCGAAAACCT GCCTCGTGAG
GCCTTTACCA GCGAGTTCAT CGCCCTGATA GCCGTGATCG TGTTGCGGGC GGCGCTGGCC
TATGGCCGCG AGCGCATCAG CTTCAAGGCG GGCATGTTGC TACGCAGCCA GATTCGTCAG
AGTGTGCTCG ACAAGCTGGT GGAGCTGGGG CCTGTGTTTA TCAAGGGGCG CCCGGCGGGC
AGCTGGGCCA GCATAGTGTT GGAGCAGGTG GAGGACCTTC ACGACTTCTA CGCTAAATAT
CTGCCGCAGA TGATGCTGGC GGGCTTTATT CCCCTGACCA TATTGGCCGT GGTGTTTCCC
ATCAACTGGG CGGCGGGGAT CATTCTGCTG GCCACCGCGC CGCTGATCCC CCTGTTTATG
ATCTTGGTGG GCATGGGCGC CGCCGATGCT AACCGCAAAA ATTTTGGCGC CCTGTCGCGC
CTCAGTGGTC ACTTCATGGA TAGGCTGAGG GGGATTGGCA CCCTACGTCT GTTCCACGCG
GGTGAGCGCG AGCAGCAGGC GATCGAGAGC GCCTCGGAGG AGTTTCGCAG CCGCACCATG
GCGGTGCTGC GTATGGCGTT TCTTAGCTCG GCGGTGCTGG AGTTCTTCGC CGCCGTCTCC
ATCGCCGTGC TGGCCGTCTA TTTCGGTTTT AGCTTTTTAG ATCATCTCGA CTTTGGTCAC
TACGGCGCAG GTATGACGCT GTTTATCGGC CTGTTTGTGC TGATTCTGGC GCCTGAGTTT
TATCAGCCTC TGCGGGATAT GGGTACTCAC TATCATGCCA AGGCCCAGGC CATAGGCGCC
GCCGAGGCGC TGATGGAGCT GCTGAATCAT CAAGGGGATG AGGCTGATGA GGCGCCGCGC
GTGCCTTTTA CAAGCGAGAC GCCACTTAGC ATTAAGCTGC AAGGGGCCGA GGTGTTAAGC
CCGGATGGCC AGGTGTTGCT GGGGCCGATA ACGGCCGAGG TTATCGGCGG CGAGCAGCTT
GCCATCGTCG GTCCGAGCGG GGCGGGCAAG ACCAGCCTGC TCAACATGTT ATTGGGCTTC
TTATCCTATC GCGGCAGCGT CCTGATAAAT GGCGTAGAGT TGAGCAGCCT AGAGAGGGAG
AGCTATCGTC ATCATCTCGC CTGGCTGGGG CAGGAGCCGC AGCTGTTTCA CGGCACCATT
GGTGACAACG TCGCCATGGG CAAGGAGATG TCGGATGAAG CCATCTATAC ATTGCTGGAC
GACGCCCGTA TCGGCGATTT TGTGCGGGCG CAGCCTCTTG GGCTCGCTCA TCCCATAGGG
GAGCAGAGCG CCGGGGTGTC CGTGGGGCAG GCCCAGCGCC TCTGTCTGGC AAGGGCCTTA
GGTCAGTCCG CCAAGCTGTT TGTGCTCGAT GAGCCGACCG CTAGCTTAGA TAGCCACAGC
GAGGCGGCGG TGATGCAGGC GCTTATTGAT GTGCGCCAGG GCGCCACCAG CCTGCTGGTG
ACCCATCGTC TGGATGCTCT CATCGATATG GATAAGATCT GGGTGCTGGA TGGCGGCAAG
CTGGTGCAGC AGGGGGATTA TCACACCCTG ATGGCCGAGC CTGGGCTGTT TAGCGACCTG
TGCCATCGAC AGGAGGAGGC GTAA
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| Protein sequence | MDKTLEKVLG RWLKQQKSAC GAYLNLTVLI GVLTGFALVA QAYLLATMLH GLIIENLPRE
AFTSEFIALI AVIVLRAALA YGRERISFKA GMLLRSQIRQ SVLDKLVELG PVFIKGRPAG
SWASIVLEQV EDLHDFYAKY LPQMMLAGFI PLTILAVVFP INWAAGIILL ATAPLIPLFM
ILVGMGAADA NRKNFGALSR LSGHFMDRLR GIGTLRLFHA GEREQQAIES ASEEFRSRTM
AVLRMAFLSS AVLEFFAAVS IAVLAVYFGF SFLDHLDFGH YGAGMTLFIG LFVLILAPEF
YQPLRDMGTH YHAKAQAIGA AEALMELLNH QGDEADEAPR VPFTSETPLS IKLQGAEVLS
PDGQVLLGPI TAEVIGGEQL AIVGPSGAGK TSLLNMLLGF LSYRGSVLIN GVELSSLERE
SYRHHLAWLG QEPQLFHGTI GDNVAMGKEM SDEAIYTLLD DARIGDFVRA QPLGLAHPIG
EQSAGVSVGQ AQRLCLARAL GQSAKLFVLD EPTASLDSHS EAAVMQALID VRQGATSLLV
THRLDALIDM DKIWVLDGGK LVQQGDYHTL MAEPGLFSDL CHRQEEA
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