| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0606 |
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| Symbol | |
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| ID | 4923274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 684935 |
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| End bp | 685876 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162139 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001092737 |
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| Protein GI | 127511540 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.865603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATA CCTGGGGCGA TATGGCGCAA TATGATCCAG TCACCTGGAA CTGGGTTATC
GCAGTCTACC TGTTTATGGC AGGCCTCTCG GCGGGCTCTA TCCTGATCGG CATCGGCCTG
CGCTGGTACA GCAAAGAGAA GGCAATAGAG AGCGCGATTT TAAAAGCCGC GGCCATCATC
AGTCCACTGG CCATCACCTT GGGTCTGGCC TGTCTGGTGT TTGACTTGAC CAAGCCGTTT
GAGTTCTGGC TGATTTTGGT CAACTACAAC TTCAGCTCTG TCATGTCTAT CGGGGTGCTG
GCACTGCTGC TCTACTCACC GATCGGCATC GCCTACTCGT TGATCGTGCT AAGAGATGAG
CTGACCAAGT GGAAATTGGG CTTCCTGGTA CCTGTGGCAA ACGCCATCAT GCCGATGCGC
AAGGCGATTG AAGTGGTGCT GTTTGTGTTA GCCATAGGTG TGGGCGCCTA TACCGGCTTC
CTCATCTCGG CGATGAACGC CTACCCTATG CTGAACACGG CTGTGCTACC GGCGCTCTTC
CTGGTGTCTG GCCTGTCAGC CGGCGCGGCG GCTAACGCTA TCGGCGCACT GCTGATGTTT
AACACCCACA GCCATGATGC CAACCTAAGT AAGATGCATG GCCTGGAACT GCCCGTGATG
CTGAGCGAGA TTATGTTCCT CTTCATGCTG TTCTGCGCCC TCTATTTCAA GGGTGGAGCT
GCTGCGGCGG CGCTGGCGTC ACTCACTACA GGTGTCTGGG CCAGCGTGTT CTGGGTCGGT
GTGGTCGGTA TCGGCTTTGC CATCCCGCTG CTCACCATGT TGATGCCGTC GCAGACACGT
CACAGCAAGG GCGTGATGAT CGCCGTGGCC TGCTGCAGCC TCACCGGCGT GCTGGCCCTG
AGACACTTCG TGATCTACGC GGGTCAAAGC TACATCAGCT AA
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| Protein sequence | MNNTWGDMAQ YDPVTWNWVI AVYLFMAGLS AGSILIGIGL RWYSKEKAIE SAILKAAAII
SPLAITLGLA CLVFDLTKPF EFWLILVNYN FSSVMSIGVL ALLLYSPIGI AYSLIVLRDE
LTKWKLGFLV PVANAIMPMR KAIEVVLFVL AIGVGAYTGF LISAMNAYPM LNTAVLPALF
LVSGLSAGAA ANAIGALLMF NTHSHDANLS KMHGLELPVM LSEIMFLFML FCALYFKGGA
AAAALASLTT GVWASVFWVG VVGIGFAIPL LTMLMPSQTR HSKGVMIAVA CCSLTGVLAL
RHFVIYAGQS YIS
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