Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0599 |
Symbol | |
ID | 4921533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 678532 |
End bp | 679308 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640162132 |
Product | hypothetical protein |
Protein accession | YP_001092730 |
Protein GI | 127511533 |
COG category | [R] General function prediction only |
COG ID | [COG3541] Predicted nucleotidyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.552776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACAG AAAACATCAA GAAAGAAATT CTGCGAAGAA TCAGAAACGC AGAAAAAGAA CATAACGTGA AAGTTCTCTA TGCTGTCGAA TCTGGTAGCA GAGCTTGGGG ATTTGAATCT CCAAATAGCG ACTATGACGT TAGATTTATT TATGCTCATC CTAAAGACTG GTATGTTTCT GTTGACTTGG AATACAAGCG AGATGTTATT GAGTATGAGA TCGTTGATGA GATTGATATA AATGGCTGGG ATATCAGAAA GGCCTTGCAG CTATTTTCCA AGTCCAATCC AGCTTTTGTA GAATGGATTC AATCATCAAT TGTTTATGTC GATGATCACT CATTTGCAAA AGGAGCAAGG CAGCTTCTCG ATACTGTATA TTCCGTAGAG AAAGGAATTT ACCATTATCG TAGCATGGCG AAGACAAACT ACAGGGGCTA TCTTAAAGAA GAAATAGTGC CAATCAAAAA GTATTTCTAT GTTCTTCGTC CTTTACTTTC AATCATGTGG CTCGAAAAAT ATCAAAAGCC AGCACCAATT GAGTTTGTAA AACTTCGGAC ATTAATACCC ACTGGTTCAA CTATAGATCA GGCTATTTCA GATCTTCTGG AGCGTAAAAA GAGAAGCCTA GAAAAAGAGT ATGCACCTGC TGTTCCAGTG TTAAATGCTT TTATTGAGTC AGAACTTGAT CGTTTAGAAA ACTATCAAGA TTCACCACAA AGAAATAGCT CACATATGGA ATCGTTAAAT TCACTGTTCC GTGTAAGCAT AAGCTAA
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Protein sequence | MITENIKKEI LRRIRNAEKE HNVKVLYAVE SGSRAWGFES PNSDYDVRFI YAHPKDWYVS VDLEYKRDVI EYEIVDEIDI NGWDIRKALQ LFSKSNPAFV EWIQSSIVYV DDHSFAKGAR QLLDTVYSVE KGIYHYRSMA KTNYRGYLKE EIVPIKKYFY VLRPLLSIMW LEKYQKPAPI EFVKLRTLIP TGSTIDQAIS DLLERKKRSL EKEYAPAVPV LNAFIESELD RLENYQDSPQ RNSSHMESLN SLFRVSIS
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