Gene Shew_0599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_0599 
Symbol 
ID4921533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp678532 
End bp679308 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content37% 
IMG OID640162132 
Producthypothetical protein 
Protein accessionYP_001092730 
Protein GI127511533 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.552776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACAG AAAACATCAA GAAAGAAATT CTGCGAAGAA TCAGAAACGC AGAAAAAGAA 
CATAACGTGA AAGTTCTCTA TGCTGTCGAA TCTGGTAGCA GAGCTTGGGG ATTTGAATCT
CCAAATAGCG ACTATGACGT TAGATTTATT TATGCTCATC CTAAAGACTG GTATGTTTCT
GTTGACTTGG AATACAAGCG AGATGTTATT GAGTATGAGA TCGTTGATGA GATTGATATA
AATGGCTGGG ATATCAGAAA GGCCTTGCAG CTATTTTCCA AGTCCAATCC AGCTTTTGTA
GAATGGATTC AATCATCAAT TGTTTATGTC GATGATCACT CATTTGCAAA AGGAGCAAGG
CAGCTTCTCG ATACTGTATA TTCCGTAGAG AAAGGAATTT ACCATTATCG TAGCATGGCG
AAGACAAACT ACAGGGGCTA TCTTAAAGAA GAAATAGTGC CAATCAAAAA GTATTTCTAT
GTTCTTCGTC CTTTACTTTC AATCATGTGG CTCGAAAAAT ATCAAAAGCC AGCACCAATT
GAGTTTGTAA AACTTCGGAC ATTAATACCC ACTGGTTCAA CTATAGATCA GGCTATTTCA
GATCTTCTGG AGCGTAAAAA GAGAAGCCTA GAAAAAGAGT ATGCACCTGC TGTTCCAGTG
TTAAATGCTT TTATTGAGTC AGAACTTGAT CGTTTAGAAA ACTATCAAGA TTCACCACAA
AGAAATAGCT CACATATGGA ATCGTTAAAT TCACTGTTCC GTGTAAGCAT AAGCTAA
 
Protein sequence
MITENIKKEI LRRIRNAEKE HNVKVLYAVE SGSRAWGFES PNSDYDVRFI YAHPKDWYVS 
VDLEYKRDVI EYEIVDEIDI NGWDIRKALQ LFSKSNPAFV EWIQSSIVYV DDHSFAKGAR
QLLDTVYSVE KGIYHYRSMA KTNYRGYLKE EIVPIKKYFY VLRPLLSIMW LEKYQKPAPI
EFVKLRTLIP TGSTIDQAIS DLLERKKRSL EKEYAPAVPV LNAFIESELD RLENYQDSPQ
RNSSHMESLN SLFRVSIS