| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0597 |
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| Symbol | |
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| ID | 4920687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 674928 |
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| End bp | 676355 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162130 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001092728 |
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| Protein GI | 127511531 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.234612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGGAA GACTAAAAAT GAATAATAAC TCTAAGTCCA CAGAGGCGCC GCGCTTCCCC
AGAATCTTCT GGATCGCCAA CGGCGTCGAG CTGCTCGAAC GAGCGGCCTA TTACGGTGTG
TTCATCGTTA TCACCCTCTA TTTGTCACGT ATTCTCGGTT TTAGCGACGT CGAAGCCGCC
TGGCTGGCGG GCTCTTTCTC GGCCGGTCTC TACTTTTTAC CTACCTTCAG CGGCGCCCTG
GCCGACAAGA TAGGCTTTCG CGGCGCCCTG TTGCTGGCGT TTGGCCTGTT AACCATAGGC
TATGCGTCGC TGGCGATATT CCCTGCGCTG ATCGAATCTC AAGGGCTGGT GGAATATGGC
AAGGAGACCA TATATCACGG CCTTAAGGAG GCGGATATTC GCTGGGCGAT CGTGCCTATT
CTTATCGTCA TCATGATAGG TGGCTCCTTC ATCAAGGCGG TGATCACAGG TACCGTGGCG
CTATCGACCA CGGCCGAGAC CCGTGCCAAG GGTTTCTCTA TCTTCTACAT GATGGTTAAC
ATTGGCGCCT TCTCGGGTAA GACAGTGGTG AAGCCGCTGC GCGAATCCAT GGGCGACCTG
GGGCTTATTA ACCTCAACTA CTTCGCCGCC ACCATGACGC TGATCGCCTT CTTCAGCATC
ATGCTCTTCT TCAAGAGCAC GGAGGAGAAC CGCTCCGGCA AGAGCCTGGG CGAGATCTGG
CAGGCGCTGC TCAAGGTACT GTCTAACGGT CGATTGATAG CCCTGATCTT GATCATCACA
GGCTTCTGGA TGGTGCAGCA TCAGCTCTAC GCCACCATGC CAAAATATGT GCTGCGTATG
GCCGGTGAGG GCTCATCGCC GTCCTGGTAC GCCAACGTCA ACCCTCTGGT GGTCTTCCTC
TGTGTCAGCT TCGTCACAGG TATGATGGCC AAGCGCAGCG CGCTGACCTC TATGACGGTG
GGGATGTTTA TCATGCCGGT ATCGGCGCTG CTGATGGCCT CGGGTAACAT GTTTGCCGGT
AGCGAGACCA TCTTGGGCAT GCACCCCATC GCCGCCATGA TGATCATAGG CATCGTATTC
CAGGGCCTGG CCGAGTGCTT CATCTCGCCG CGTTTCCTGG AGTATTTCTC GCTACAGGCG
CCTAAGGGCG AAGAGGGTCT CTACCTGGGC TTCTCGCACC TGCACTCTTT CATCAGTTCA
TTGCTGGGCT TCGGTCTGTC GGGTTACCTG CTGGAGGCCT ACTGTCCGGA TCCGCGCGTC
TATAACGACC ACGCCGCCTG GGTCGAGGCT TCGGCACATG CTCACTACAT CTGGTATGTA
TTTGCCGCTA TCGCCAGTGT GTCGGCGGTG TCACTCATCA TCTATGGCGC CGTGATCAAG
CGTATCGATG CCAAGAATGA TACCGACGCC GAGATGGCAA CCGCCTAA
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| Protein sequence | MPGRLKMNNN SKSTEAPRFP RIFWIANGVE LLERAAYYGV FIVITLYLSR ILGFSDVEAA
WLAGSFSAGL YFLPTFSGAL ADKIGFRGAL LLAFGLLTIG YASLAIFPAL IESQGLVEYG
KETIYHGLKE ADIRWAIVPI LIVIMIGGSF IKAVITGTVA LSTTAETRAK GFSIFYMMVN
IGAFSGKTVV KPLRESMGDL GLINLNYFAA TMTLIAFFSI MLFFKSTEEN RSGKSLGEIW
QALLKVLSNG RLIALILIIT GFWMVQHQLY ATMPKYVLRM AGEGSSPSWY ANVNPLVVFL
CVSFVTGMMA KRSALTSMTV GMFIMPVSAL LMASGNMFAG SETILGMHPI AAMMIIGIVF
QGLAECFISP RFLEYFSLQA PKGEEGLYLG FSHLHSFISS LLGFGLSGYL LEAYCPDPRV
YNDHAAWVEA SAHAHYIWYV FAAIASVSAV SLIIYGAVIK RIDAKNDTDA EMATA
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