| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0591 |
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| Symbol | |
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| ID | 4920659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 667823 |
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| End bp | 669412 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640162124 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001092722 |
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| Protein GI | 127511525 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.559544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCATCG AAGATCCCAT AGTGACCGGC CTTGCAAACG GCTGGAAACA TATAGATGCC
AGTCAACTGA CCCAAGACCA AACCCTTGAG GCCGACGTGG TGATCGTCGG CAGCGGCGCC
GGTGGTGGCG TGGCGGCCGA GATCATGACC GAGGCGGGGC TGTCTGTGAT TATCATCGAA
GGTGGGCCAC TGAAATCGTC CGAGAGCTTC AACATGGAGG AAAGGCGCGC CTATCCCAAC
CTCTATCAGC AAGCTGCCTC GATGAAGACC AAGGACAAGG CGATCGGCAT CTTTCAGGGA
CGCGCCGTGG GTGGCTCCAC CACCATCAAC TGGACTACCT CTATCCGCAC CCCGGAAAAT
GCCCTGGCGT TCTGGGCCGA ACACAAGTCG GTCGAAGGCC TCTCCAGGGA GGCGCTAACG
CCCTGGTTCG AGAAGATGGA GCAGCGGTTG AGCATCACAA AGTGGCCCTT CGAGCCCAAC
CGCAACAACA TGGCGCTCAA GCAGGGTTGT GAGGCTTTGG GCTGGGACTA CACCGTCATC
AAACGCAACG TGGCCGGCTG CTGGAACACT GGCTACTGCG GCATGGGCTG TCCGGTCAAC
GCCAAGCAGT CTATGCTGGT CACCACCATA CCGGCGGCGC TGGATCGCGG CGCGACCCTG
GTGAGCCGCG CCAAGGTGAG CAAGATAGAA CACCATAACG ACAAGGTGTA CGCCCTCAAG
GCTCAGGCGT TAACCGAGTC GCTGCGCCCC AGCGGTGTGC AGCTGATGTT AAAGGCCAAG
CACTATATTC TCAGCGCTGG CGCCATCCAT ACGCCGGCCC TGATGATGCG CTCCCGCCTG
CCGGATCCGC AAAAGCTGCT GGGTAAGCGC ACCTTCCTGC ACCCAACCGT ACTCAGTGGC
GCCCTGTTTA ACGACGCCAT CAATGGCCAT AGCGGCGCCC CACAATCCAT CTATTCGGAT
CAATTTGTCT GGCAAGATGG CGCCGACGGC GAGCTGGGCT ATAAGCTGGA GGTGCCGCCC
ATTCATCCGG TGTTAATTGC CTCGAAATCC CTAGGATATG GCCAGAGTCA CGCCGAGCTG
ATGGCCCAGT TTAATCAGCT GCAGGTGACG ATTGCTCTGA TGCGAGATGG CTATCATGCC
GACAGCCCGG GTGGCCAGGT GCTGCTGACA GACAAGGGCT ATACCCTGGA TTACCCACTG
ACCGACGCCT TCTGGCGGGC CGCACGGCGC GCCTTTGCCA GCATGGCCGA GCTACAGTTT
GCCGCCGGGG CGCAGAAAGT GTTGCCTATG AGCGAGGGGA TGCCCTATCT GCCGAGTTGG
CAGGCGGCCA AGGAGGCTAT CGCCGATATG ACGCTGGCGC CCTTTAAGAC AGTGGTGGCC
TCGGCTCACG TGATGGGCGG CTGCCCGCTG GGCGAAGATA AGCAGATGGC CATGGTAGAT
AGCCGGGGGC GCAGCCATTA TCTGGAGAAT TTGTCGGTGA TGGACGGCTC GCTGTTTCCC
ACCAGTCTCG GTGCCAACCC TCAACTCTCC ATCTATGGCA TTACCGCCCG CAACGCCAGT
CTGCTGGCCG AAGAGCTGAG CGGCGCTTAA
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| Protein sequence | MAIEDPIVTG LANGWKHIDA SQLTQDQTLE ADVVIVGSGA GGGVAAEIMT EAGLSVIIIE
GGPLKSSESF NMEERRAYPN LYQQAASMKT KDKAIGIFQG RAVGGSTTIN WTTSIRTPEN
ALAFWAEHKS VEGLSREALT PWFEKMEQRL SITKWPFEPN RNNMALKQGC EALGWDYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PAALDRGATL VSRAKVSKIE HHNDKVYALK
AQALTESLRP SGVQLMLKAK HYILSAGAIH TPALMMRSRL PDPQKLLGKR TFLHPTVLSG
ALFNDAINGH SGAPQSIYSD QFVWQDGADG ELGYKLEVPP IHPVLIASKS LGYGQSHAEL
MAQFNQLQVT IALMRDGYHA DSPGGQVLLT DKGYTLDYPL TDAFWRAARR AFASMAELQF
AAGAQKVLPM SEGMPYLPSW QAAKEAIADM TLAPFKTVVA SAHVMGGCPL GEDKQMAMVD
SRGRSHYLEN LSVMDGSLFP TSLGANPQLS IYGITARNAS LLAEELSGA
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