Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0585 |
Symbol | |
ID | 4920946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 662616 |
End bp | 663251 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640162118 |
Product | cAMP-regulatory protein |
Protein accession | YP_001092716 |
Protein GI | 127511519 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000009188 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.481967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTGA TTGGTAAGCC TAAACCTGAT CCAACGTTGG AATGGTTTTT ATCACACTGT CACATTCATA AGTACCCAGC CAAAAGCACT CTGATCCATG CGGGTGAAGA CTCTGACACG CTGTACTACA TAGTGAAGGG TTCTGTTGCC GTCTTGATTA AAGATGAAGA AGGCAAAGAG ATGATCCTCT CTTACCTGAA CCAAGGTGAC TTCATCGGTG AATTGGGTCT GTTTGAAGAG CAAGCCGAGC GTACCGCTTG GGTTCGTGCC AAGCAAGCCT GTGAAATCGC TGAGATCTCT TACAAGAAAT TTAAGCAGCT GATCCAGGTT AACCCTGAGA TCCTGATGAA GCTCTCTTCT CAGATGGCTT ACCGTCTGCA AAGCACCAGC CAGAAAGTGG GCGATCTTGC CTTCCTGGAC GTTGCCGGTC GTATCGCGCA GACGCTACTG CACCTGGCTA AGCAACCAGA CGCCATGACC CATCCAGACG GCATGCAGAT CAAGATCACT CGCCAAGAGA TTGGTCAGAT CGTGGGCTGT TCTCGCGAAA CCGTGGGCCG TATCCTCAAG ATGCTTGAAG AGCAGAATCT GATCCAAGCA CACGGCAAAA CTATCGTGGT TTACGGTACC CGCTAA
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Protein sequence | MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEDSDT LYYIVKGSVA VLIKDEEGKE MILSYLNQGD FIGELGLFEE QAERTAWVRA KQACEIAEIS YKKFKQLIQV NPEILMKLSS QMAYRLQSTS QKVGDLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC SRETVGRILK MLEEQNLIQA HGKTIVVYGT R
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