| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0582 |
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| Symbol | |
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| ID | 4921409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 660077 |
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| End bp | 661414 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640162115 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001092713 |
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| Protein GI | 127511516 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.684402 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.489398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGA TCCGCACTAA GCTCAGCCTA TGGCTGTCGG CCTTAGTCAT CATCTCCACC
TTCGTGGCGA TCGTCATCTT CGAGTCCATG TTGCGTCAGG CATTTCACGA CTCGATCATC
GACCGCCTCG AAGAAGATTT AGAGCAGGTG TTACTGGCGA TTCAGTTCGA CAACGGCGAC
ATCAGCATAG ACCCCAACCA GGTCTCTAAC TTCTACAAGC CCGTCTATTC CGGGCGCTAC
TACCAACTCA ACCTCAAAGA TATCGAGCTG AGATCCCGCT CCCTTTGGGA TCAACGCCTG
GAGATAGAAC CCCTCTCCAA GGGCCAGACC CGGGTATGGC AGACCAAGGG GCCACAGAAT
CACGATATTC AACTGCTCTC CCTGGGACTA AGCAGCGCCG ATGCCAAGGT GCAGGCGACG
CTCACGGTCG CCCAGGATCT CAGTATCGGC CGCCAGGTAT TCTCCCAGGT CTATGGCACT
AAGCTGTCGG TCAACCTGGC CATGCTGCTT ACCATGGTGG CGGGGATCTT CATTCTGCTG
AGGCAATCCT TCAAACCGAT CAACGACATG CAGCGGGCGC TGATGAAGCT CAGAGAGGGG
GAGATCACCG CGCTGGACAC CAGCAAGATC CCACCAGAGC TGGCGCCCCT GGCCCAGACC
TACAACGAAT TGTTGCAATA CTCGAGCAAG CAGATGGAGC GCAGCCGCAA CAACCTGGGC
AACCTCAGCC ATGGCCTCAA GACGCCGCTG GCGGTGATGC AGCAGCAGGT CGAGGTGCTG
GGACTAAAAG ATCCCGAGGC CGCCAGCGCC ATGCAGAGCC AGCTGGATCA GATCCACAAG
ATGATAGAGC GCAAGTTGGC GGCGGCGCGA ATTACCGGCG ACATGCTGCC CGCGGCCCAG
ATGCAGCTAC CCAAAGATCT ACAGGATCTG GCCCAGACCC TCACCAAGGT GCACGGCCAC
AAGGCGATCG CCTGCGAGTT TAGCCTGGAC GAGCGCTTAA GCCGCCTGCC TATTCACCGA
GAAGATGGCA TGGAGCTTAT CGGTAACCTG CTGGATAACG CCTTCAAGTG GGCTGACAGC
AAGGTGGCGG TGTCGACGGC GCAAACCGAT GAGCAGATAT TGCTGACCAT AGAAGATGAT
GGCCCGGGGG TCGCCGACGA GGCCCTCAGC CTGCTGACCC AGAGGGGCAA GCGCCTAGAC
GAGGCGATCA TGGGCCATGG CCTTGGGCTC TCAATCGTCA AGGATATTGC CGAGCAGTAT
GAGATAAGCC TAGCCTTCGA GCACAGCCAG CAGCTGGGCG GACTGAAGAT CACCCTTGGC
TTAAAGGATA GGCTTTAA
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| Protein sequence | MISIRTKLSL WLSALVIIST FVAIVIFESM LRQAFHDSII DRLEEDLEQV LLAIQFDNGD
ISIDPNQVSN FYKPVYSGRY YQLNLKDIEL RSRSLWDQRL EIEPLSKGQT RVWQTKGPQN
HDIQLLSLGL SSADAKVQAT LTVAQDLSIG RQVFSQVYGT KLSVNLAMLL TMVAGIFILL
RQSFKPINDM QRALMKLREG EITALDTSKI PPELAPLAQT YNELLQYSSK QMERSRNNLG
NLSHGLKTPL AVMQQQVEVL GLKDPEAASA MQSQLDQIHK MIERKLAAAR ITGDMLPAAQ
MQLPKDLQDL AQTLTKVHGH KAIACEFSLD ERLSRLPIHR EDGMELIGNL LDNAFKWADS
KVAVSTAQTD EQILLTIEDD GPGVADEALS LLTQRGKRLD EAIMGHGLGL SIVKDIAEQY
EISLAFEHSQ QLGGLKITLG LKDRL
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