| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0573 |
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| Symbol | sspA |
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| ID | 4921867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 648785 |
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| End bp | 649414 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162106 |
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| Product | stringent starvation protein A |
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| Protein accession | YP_001092704 |
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| Protein GI | 127511507 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.206079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.372296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGTTG CTGCCAATAA ACGCTCAATC ATGACCCTGT TTTCAGGCGC CGACGATCTC
TATAGCCATC AAGTCCGTAT CGTCTTGGCG GAAAAGGGAG TGACTGTCGA TGTTCTGCAG
GTGGATCCTA GCGATATGCC TGAAGATCTT ATTGAGCTAA ACCCATACAA CACAGTGCCA
ACTTTGGTTG ACCGTGAGTT GGTGCTATAT AACTCACGCA TCATAATGGA ATATCTGGAT
GAGCGTTTCC CGCATCCACC TTTGATGCCT GTCTACCCGG TTTCCCGTGG CCAGACGCGT
CTGATGATGC ACCGTATCGA AAACGACTGG TATAGCCTAG TCGATCGCAT CCGTAAGGGT
GATCGTGCCG ATGAGGCGCG TAAAGAGCTT CAGGAGAGCC TGACCTCTAT TGCCCCTATC
TTTAACGAGA TGCCTTACTT CATGGCCGAA GAGTTTGGTC TGGCCGACTG TTACCTGGGC
CCACTGTTGT GGCGTCTGCC AGTACTGGGC ATCGAGCTGG ACAGCCGTAC CGCCAAGGAA
GTTAAAGCCT ACATGACACG TCTATTTGAC CGTGACTCAT TCAAGGCGTC TTTGACCGAG
GCTGAGCGCG AAATGCGCAT GGGTATCTAA
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| Protein sequence | MAVAANKRSI MTLFSGADDL YSHQVRIVLA EKGVTVDVLQ VDPSDMPEDL IELNPYNTVP
TLVDRELVLY NSRIIMEYLD ERFPHPPLMP VYPVSRGQTR LMMHRIENDW YSLVDRIRKG
DRADEARKEL QESLTSIAPI FNEMPYFMAE EFGLADCYLG PLLWRLPVLG IELDSRTAKE
VKAYMTRLFD RDSFKASLTE AEREMRMGI
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