| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0571 |
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| Symbol | |
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| ID | 4922230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 646761 |
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| End bp | 647975 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162104 |
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| Product | cytochrome b/b6 domain-containing protein |
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| Protein accession | YP_001092702 |
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| Protein GI | 127511505 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000252718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.241378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGA ATATTATCGA TTGGATTGAT GCGCGCATCC CTATGACGGC GACCTACAAC
CGTCACGTAG GTCAATATGC GACGCCGACC AACTTCAACT TCTGGTACTT CTTTGGCTCG
CTAGCCATGC TAGTACTGGT TAACCAGCTG CTGACCGGTA TCTGGTTGAC CATGAACTAT
GTACCAACCG CAGAAGGTGC CTTCGCCTCT ATCGAATACA TCATGCGTGA TGTCGAGTAC
GGCTGGTTGC TGCGTTACAT GCACTCAACC GGTGCATCGG CCTTCTTCGT GGTGGTTTAT
CTGCACATGT TCCGTGGTCT GATCTACGGT TCTTATCAGA AGCCTCGTGA GCTGCTGTGG
CTGTTCGGTA TGTTGATCTT CCTCGTACTG ATGGCTGAAG CTTTCATGGG TTACCTGCTT
CCTTGGGGAC AGATGTCTTA CTGGGGCGCA CAGGTAATTA TCTCTCTGTT TGGTGCTATC
CCTGTTATCG GTGACGACCT GACACTATGG ATTCGTGGTG ACTTCGTTGT TTCTGGTGCG
ACACTGAACC GCTTCTTCGC GCTACACGTT ATCGCGCTGC CATTGGTGCT TGTGGTACTG
GTGTTCCTAC ACCTGATCGC TCTGCACGAA GTGGGTTCTA ACAACCCAGA CGGTATCGAG
ATCAAGAAGA ACAAAGATGA GAATGGCTGG CCGAAAGACG GTATCCCATT CCACCCTTAC
TACACAGTAA AAGATATCAT GGGTGTCGCT GGCTTCCTGA TCGTCTTCTG CTACGTATTG
TTCTTCATGC CTGAAGGCGG TGGATACTTC CTCGAGAAGC CAAACTTTGA AGCGGCTAAC
CCGATGAAGA CACCTGAGCA CATTGCGCCA GTTTGGTACT TCACACCATT CTACGCCATC
CTACGTGCGA TTCCTGACAA GCTGTTAGGG GTTGTGGGTA TGGGTCTAGC GATTGCCGTA
CTCTTCGTTC TACCTTGGTT AGATCGTTGT AAGGTTAAGT CAATCCGCTA CCGTAGCATG
ATTCATAAGC TGAACATTGG TCAGTTTGCC GTATCTTTCG TTATCTTAGG CTACCTGGGT
GCCGTACCTG CGACGCCAAC GCTGACAATC GCTGCGCGCG TCTTCACTCT GACATACTTC
GGTTTCTTCT TAGCGCTGTG GTTATACAGT AAGAATGAGA AAACTAAGCC TGTACCAGAG
AGGTTGACCC ACTAA
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| Protein sequence | MVKNIIDWID ARIPMTATYN RHVGQYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY
VPTAEGAFAS IEYIMRDVEY GWLLRYMHST GASAFFVVVY LHMFRGLIYG SYQKPRELLW
LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDFVVSGA
TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PKDGIPFHPY
YTVKDIMGVA GFLIVFCYVL FFMPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI
LRAIPDKLLG VVGMGLAIAV LFVLPWLDRC KVKSIRYRSM IHKLNIGQFA VSFVILGYLG
AVPATPTLTI AARVFTLTYF GFFLALWLYS KNEKTKPVPE RLTH
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