| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0564 |
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| Symbol | mutL |
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| ID | 4921930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 639265 |
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| End bp | 641160 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162097 |
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| Product | DNA mismatch repair protein |
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| Protein accession | YP_001092695 |
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| Protein GI | 127511498 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
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| TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.273606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAC GTATTTTGCC TCCTCAACTG GCTAACCAGA TTGCCGCCGG GGAGGTGGTA
GAGCGTCCTG CCTCTGTGAT CAAGGAGTTA GTAGAGAACA GCCTGGATGC CGGTGCGACC
CGGGTCGATA TCGAAATAGA CAAGGGCGGC AGCAAGCTGA TTAAGATCAC CGACAACGGC
TCAGGCATTC CCAAGGAGGA GCTGAGTCTG GCACTGTCCC GTCATGCCAC CTCTAAGCTG
GCCTCGTTAG ACGACCTCGA TGCCATCTTA AGCTTTGGCT TTCGCGGCGA GGCGCTGGCC
AGTATCAGTT CGGTATCCCG CTTGACGTTA ACCTCCCGCA CCCAGGAGCA GAGCGAGGCC
TGGCAGGCCT ATGCCGAGGG CTCCGAGATG GCGGTTCGGG TGATCCCGGC GGCGCACCCT
GTCGGTTCGA CGGTGGAGGC GGCGGATCTC TTCTTCAATA CCCCGGCCAG ACGTCGATTC
TTAAAGAGCG ATAAGACAGA ATTTACCCAT ATCGATGAGT GGCTTAAACG TATCGCTCTG
GTGCGCAGCG AGATCCATTT TACCCTTAAG CACAACGGCA AGCAGGTGCG TAATTACCGC
CCGGCCAAGA CAGAGGCGCA GTATCTGCAG CGCCTGGCGC AGGTCAGCGG CAAGGCCTTC
GCCGACAATG CCCTCAGGGT AGATTGTAAC CATAATGGTC TTAGCCTCAG CGGCTACATT
CAGTCGCCAT TTAGCGAGAT GGCGGTTGGC GATACTCAAT ATTTCTATGT AAACGGCCGC
CTAGTGCGTG ATCGCCTGGT CAATCATGCG GTGCGTCAGG CCTTTGCCCA GCAGCTGCAG
GGGGAGCAGG TCGCCTTCGT GCTCATGCTG AACCTGGATC CCCATCAGGT GGATGTCAAC
GTGCATCCGG CCAAGCATGA GGTGCGCTTC CACGAGAGCC GATATGTGCA TGACTTTATC
CTGCAGGCGC TGGAATCGGC ACTGCGTCAG TCGAGCGAGT TAGCCTTCGA GGCAGCACTC
GACACTCAGG TAACTGACCA GAATAGATCC GCCTCCTATA TTCGTCCGCT ACAGACTCAG
CAAAGTGACA CAGGCTCTAA TCAGATTGCC CATGGCGATA CCGAAGAAAA CGCCTTATGG
CTTGCGAATG AACGCCCAGC CTATGGCGAG CGCGAAGCCA GTCGCCAAGC AGGTGGCCAG
AGAGTGCAAG AGACCCAGAT GAGCAGCTAT GGTAGCGGCC AGTCTGGCGG GCGAGGGCGC
AGCTATGCCA GTACCGAGCT TCCTAGCCAG GCGGCAGTCG ATAGTTATGC CCAGTTGATG
ACCACGCCAG GCGTGTCGAG TCAGGCAAAC CAAGCAGATG ACAGCCATCT TCCGCCCATG
CCTCAGGTGC TCGACGGTCA ATATTGGCTC TTAGTCAGGG GTAGTGAGCT GGCGCTATTG
AGCCTTAGCT GTGCGGCGCG CGAAGTGACC CGCCGCGAGA TTGAAGCCAA GCTGGATGCG
GGGCTGATTG GTCAGCCGCT GTTGATGCCT GTGTCGGTCA AGGTGGATGA AGATTGGCAG
CAAACCTTGG TCGAAAGAGA GCTTTTGGTT AGAAAATTGG GTTTAGAGCT AACTATTCGC
CTCGGCCAGT TGATAATTAA AAAAGTGCCC CCATATCTAA GGCAGAGTCA GCTGGCGAGC
GTGATCCCTG AGTTTCTCCA GTGGATTCGC TTCGAAGAGC CGACAACGGA AGCCCTGGTT
AACTGGTTGG TGAACCAGTC GGGTGAACAG TTTAATTCGG CGAGCCGACT CTGGGCCGGC
CTCATGGGGT TACCCGAGTC GCAGCAGCAA GAAATTTTAT CTTTGGCCAA GGTGATGCCT
TGGCAAACAT GGTTAGGTGA GCAAACGAGT GAATAG
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| Protein sequence | MTIRILPPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIEIDKGG SKLIKITDNG
SGIPKEELSL ALSRHATSKL ASLDDLDAIL SFGFRGEALA SISSVSRLTL TSRTQEQSEA
WQAYAEGSEM AVRVIPAAHP VGSTVEAADL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL
VRSEIHFTLK HNGKQVRNYR PAKTEAQYLQ RLAQVSGKAF ADNALRVDCN HNGLSLSGYI
QSPFSEMAVG DTQYFYVNGR LVRDRLVNHA VRQAFAQQLQ GEQVAFVLML NLDPHQVDVN
VHPAKHEVRF HESRYVHDFI LQALESALRQ SSELAFEAAL DTQVTDQNRS ASYIRPLQTQ
QSDTGSNQIA HGDTEENALW LANERPAYGE REASRQAGGQ RVQETQMSSY GSGQSGGRGR
SYASTELPSQ AAVDSYAQLM TTPGVSSQAN QADDSHLPPM PQVLDGQYWL LVRGSELALL
SLSCAAREVT RREIEAKLDA GLIGQPLLMP VSVKVDEDWQ QTLVERELLV RKLGLELTIR
LGQLIIKKVP PYLRQSQLAS VIPEFLQWIR FEEPTTEALV NWLVNQSGEQ FNSASRLWAG
LMGLPESQQQ EILSLAKVMP WQTWLGEQTS E
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